Thiomonas arsenitoxydans: THI_1295
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Entry
THI_1295 CDS
T02347
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03420
Nucleotide excision repair
thi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THI_1295 (uvrD)
03430 Mismatch repair
THI_1295 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_1295 (uvrD)
Enzymes [BR:
thi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THI_1295 (uvrD)
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THI_1295 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
THI_1295 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAZ87986
UniProt:
D6CPQ6
LinkDB
All DBs
Position
1286141..1288486
Genome browser
AA seq
781 aa
AA seq
DB search
MSALIQQLNPEQRAAVTLPAENALILAGAGSGKTRVLTTRIAWLISTGQVTPAGILAVTF
TNKAAKEMMARLSAQLPIPVRGMWIGTFHGLCNRFLRAHWREAGLPQTFQILDIQDQLAS
IKRLLKALNVDDERHPPKQVQWFINGAKDQGLRPGDVEARDPQSRQLAEIYLAYEAQCTR
DGVADFAELLLRSYEILRDNAAIRSHYRQRFRHILVDEFQDTNRLQYQWLKQLAGPEDAQ
GACVFAVGDDDQSIYAFRGAHAGNMDDYQREFRVRHLIKLERNYRSHGHILDSANTLIAN
NARRLGKNLRTEAGAGEPVRVFEAPSDYAEAQWLIEEIRQLLREGLVHSEIAVLYRANAL
SRVIEGALFNAGLPYRVYGGLRFFERAEVKHALAYLRLLDNPQDDTAFLRVVNFPARGIG
ARTLEQLQDAARLRATPLSEAVDALGGRGAASLQAFLDLVAQMRFQTAAISLPELVRHVL
EASGLNAHYREEREGQERLENLEELVNAAAAFVTQEGFGLQATAQQRQALGAAPDSFAAT
DGIDPATGETLSPLTAFLTHAALEAGDNQAQNGQDAIQMMTVHAAKGLEFDAVFITGLEE
GLFPHENALSETDGVEEERRLMYVAITRARKRLYLSLAQTRMLHGQTRYNLRSRFFDELP
AESLKWLSAKLPGFGGGFGADQHSSWSYTPKVSVPSFTPATSNAGSPSSTGFSPAGVRGA
SSSGARPHGLRIGQAVFHNKFGEGVVLSLEGNGEDTRAQVKFNRHGAKWLALNIAKLTPV
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctcatccaacaactcaatcccgagcagcgcgccgctgtcaccctgcctgct
gaaaatgctctgatcctcgccggcgccgggagcggcaaaacgcgggtgctcaccacgcgc
attgcctggttgatttccaccgggcaagtcacgcccgcaggcattctggccgtgaccttc
accaacaaggcggcgaaggaaatgatggcgcggttgtcggcgcaactgcccattccagtg
cggggtatgtggatcggcacttttcacggtctgtgcaaccgctttctgcgggcgcactgg
cgcgaggccgggttgccgcagacttttcagattctcgacatccaggatcagctcgccagc
atcaaacggctgctcaaggcgctaaatgtggacgatgaacgccacccgcccaagcaggtg
caatggttcatcaacggcgccaaagatcagggtctgcgtccgggcgatgtggaagcgcgc
gatccgcaaagccgacaactggccgagatctaccttgcctacgaggcccaatgcacgcgc
gacggcgtggccgattttgccgagctgctgctgcgctcctacgagattctgcgcgacaac
gccgccatccgttcgcattaccgccagcgcttccggcacatcctggtggacgagtttcag
gacaccaaccgcctgcaatatcagtggctcaaacagctcgccggaccggaggacgcgcag
ggcgcttgcgtgtttgccgtgggcgacgacgatcagagcatctatgcctttcgcggggcg
catgctggcaatatggacgattaccagcgcgagtttcgtgtccgtcacctcatcaaactg
gagcgcaattaccgctcgcacggccacattctcgacagcgccaacaccctgatcgccaac
aacgcccgccgcctgggcaagaacctgcgcaccgaggccggtgcgggcgagccggtacgc
gtgttcgaggcgccgagcgactatgccgaagcccagtggctgatcgaggaaatccggcaa
ttgctgcgcgaggggctcgtgcatagcgagatcgccgtgctgtatcgcgccaacgcgctg
tcgcgggtcatcgaaggggcgctgttcaatgccgggttgccttaccgcgtgtatggcggt
ctgcggtttttcgagcgagcggaggtcaagcatgcgctggcctacctgcgcctgctcgac
aacccgcaggacgacaccgccttcctgcgcgtagtcaacttccccgcgcgcggcatcggc
gcgcgcactctggagcagttgcaagacgccgcccgtctgcgcgccacgccgctgagcgaa
gccgtggacgccctcggggggcgtggtgcggccagcctgcaggcctttctcgatctagtg
gcgcagatgcgctttcagacagccgcgataagcctgcctgaactggtgcgccatgtgctc
gaagccagcggcctcaacgcccactaccgcgaggaacgagagggtcaggagcggctggaa
aacttggaggaactggtcaacgccgctgccgctttcgtcacccaggaaggctttggccta
caagcgacggcgcagcagcgtcaggcgcttggagccgcgcccgacagcttcgccgccaca
gacggcatcgatcccgccaccggcgaaaccctctcgccgctgaccgcctttctcacacac
gccgcgctcgaagccggcgacaaccaggcgcagaacggacaggacgccattcagatgatg
accgtccacgccgccaagggactggagttcgacgccgtgttcattaccgggctggaagaa
ggcttgttcccgcacgaaaacgcgctgagcgaaaccgatggcgtggaagaagagcgtcgg
ctgatgtatgtggccatcacccgcgcgcgcaagcgcctctacctcagcctagcccagacc
cgcatgctccatggccagacgcgctacaacctgcgcagccggttctttgacgaacttccg
gccgaatcgctcaagtggctcagcgccaaactgccggggttcggcggcggtttcggcgcc
gaccagcacagcagttggagttacaccccgaaagtgtcggtgccgtcgttcacgccagcg
acttccaacgccggatcaccctcaagcactgggttttctccggcaggcgtgaggggggca
agttcgtcaggagcacgcccgcacggcctgcgcatcggtcaggccgtgtttcacaataaa
ttcggtgagggcgtcgtgctcagcttggaaggcaacggcgaagacacccgagcccaggtc
aagttcaaccgtcacggcgccaagtggctcgcgctgaacatcgccaaactcacgccagtg
aattag
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