Thiomonas arsenitoxydans: THI_1399
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Entry
THI_1399 CDS
T02347
Name
(GenBank) putative Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THI_1399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_1399
Enzymes [BR:
thi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THI_1399
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THI_1399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAZ88086
UniProt:
D6CQ06
LinkDB
All DBs
Position
1387607..1388290
Genome browser
AA seq
227 aa
AA seq
DB search
MQGDDAPLSSSLFYDPHCRLCPRLAAFLHQVKQDHPDFACLPVPPLGPLDAPLLIAGLAP
GLKGANASGRPFTGDGAGPLLFGTLTELGLASRPVPVRIGDHPSTLRADDGLQLHGCRIS
NAVKCLPPENKPLPAEIRTCNRFIAAEITAMTNLRVIVALGKVAHDAVLMALGQKASSAR
FAHAAEHRLGDYMLIDSYHCSRYNQNTGRLTASMFRAVFEQALHLVN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtgacgacgcaccgctttcgagctcacttttttatgatccgcattgtcgtctg
tgcccacgactagcggcctttttacaccaagtcaaacaagatcatcccgattttgcctgt
ctgccggtgccgcctttggggccgctggatgcgccgctgctcatcgcgggcctggcgcca
ggcctgaagggggccaatgcctcggggcgcccgttcacgggagatggcgccgggccgctg
ctgttcggcacgctcaccgaactgggtctggcttcgcggcccgtacccgtgcggatcggc
gatcacccctcgacgctgcgggccgacgatggcctgcaactgcacggctgccgcatcagc
aacgcggtgaaatgtctgccgcctgaaaacaagcccttgcccgcggagattcgcacctgc
aatcgattcatcgccgcagagatcacggccatgacgaatctgcgggtgatcgtcgctctg
ggcaaggtagcgcacgacgcggtgctcatggcgctggggcagaaagcctcctcggcccgc
ttcgcccatgccgcagagcatcgcttgggcgactatatgctgatcgacagctaccactgc
agccgctacaaccagaacaccggccgcttgaccgcctcgatgtttcgcgcggtgttcgag
caggccttgcaccttgtgaactga
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integrated database retrieval system
