Thiomonas arsenitoxydans: THI_1617
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Entry
THI_1617 CDS
T02347
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thi
Thiomonas arsenitoxydans
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thi03016
]
THI_1617 (truB)
Enzymes [BR:
thi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THI_1617 (truB)
Transfer RNA biogenesis [BR:
thi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THI_1617 (truB)
Prokaryotic type
THI_1617 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAZ88296
UniProt:
D6CSM7
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All DBs
Position
1606262..1607299
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AA seq
345 aa
AA seq
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MNVQKTPWEAVNGVLLLNKPRGLTSQQALFRVRRRLRAAKAGHGGTLDPLADGLLMLCFG
AATKFAQRHLEADKRYVAVLQLGVRTTTDDAEGEIVERRAVHVSQSQVDAVLPRFIGAIS
QTPPVYSALKRDGKPLYAYARAGETVEVAARTVQIHSMDLLSLQNDQLTLAVHCGKGTYI
RALARDIGEALGCGAHLAALTRTASGGFSLEQALTLDEAEALASADLRSRLLPTDVLLQS
SPRQNLDLALAQRFLHGARLSGLAPDEPVVPGEDVRVYGPLAAGQDAVLLGIGAWEQGAE
SVVLSPRRLLCSDELAPARTFAIPPPISQPRTESLPESLHQDATP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtccagaaaacgccttgggaggcggtcaacggcgtgctcctactgaacaagccc
cgcgggttgacctcgcagcaggctttgtttcgcgtgcgccgcaggctgcgcgccgcgaag
gccgggcatggcggcacgctcgatcctctggccgacggcctgttgatgctttgcttcggc
gccgcgaccaagttcgcccagcgtcacctcgaagccgacaaacgctatgtggctgtactg
caactgggcgtgcgcacgacgaccgatgacgccgaaggtgagatcgtcgaacgccgtgcg
gtacatgtgagccagtcgcaggtcgatgccgttctgccgcggttcatcggcgccatcagc
cagacgccgccggtgtatagcgcgctcaagcgcgacggaaagccgctttacgcctatgcc
agggcgggcgagaccgtcgaggtggcggcccgcacggtgcaaattcactcgatggacttg
ttgtcgctgcaaaacgatcaactcacgctggccgtgcattgcggcaagggcacatacatt
cgcgcgctggcgcgtgacatcggtgaggcgctaggctgtggcgcgcatctggcggcactg
acgcgcacggcaagcggcggtttttcgctggaacaggctttgacgctcgacgaggccgaa
gcgctggcctctgccgatctgcgcagcaggctgctgccgaccgacgtgctgctgcaatct
tcgccgcgccagaatctcgaccttgccttggcccagcggtttttgcacggtgctcgtctg
agtggtttggcgccggatgaacctgtagtgccgggcgaagacgtacgggtttacggaccg
ctagcggcgggccaggacgccgtgctgctgggcatcggcgcctgggagcaaggcgcggag
tcggttgtgttatcgccgcgccgcctgctttgctccgacgaactcgcccctgccagaact
tttgcgataccgcctcccatttcacaaccccgaaccgaatctctccccgaatctctccat
caggacgcaacaccatga
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