Thiomonas arsenitoxydans: THI_2678
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Entry
THI_2678 CDS
T02347
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi00010
Glycolysis / Gluconeogenesis
thi00020
Citrate cycle (TCA cycle)
thi00260
Glycine, serine and threonine metabolism
thi00280
Valine, leucine and isoleucine degradation
thi00310
Lysine degradation
thi00380
Tryptophan metabolism
thi00620
Pyruvate metabolism
thi00630
Glyoxylate and dicarboxylate metabolism
thi00640
Propanoate metabolism
thi00670
One carbon pool by folate
thi00785
Lipoic acid metabolism
thi01100
Metabolic pathways
thi01110
Biosynthesis of secondary metabolites
thi01120
Microbial metabolism in diverse environments
thi01200
Carbon metabolism
thi01210
2-Oxocarboxylic acid metabolism
thi01240
Biosynthesis of cofactors
Module
thi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
thi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
thi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
THI_2678 (lpdA)
00020 Citrate cycle (TCA cycle)
THI_2678 (lpdA)
00620 Pyruvate metabolism
THI_2678 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
THI_2678 (lpdA)
00640 Propanoate metabolism
THI_2678 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THI_2678 (lpdA)
00280 Valine, leucine and isoleucine degradation
THI_2678 (lpdA)
00310 Lysine degradation
THI_2678 (lpdA)
00380 Tryptophan metabolism
THI_2678 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
THI_2678 (lpdA)
00670 One carbon pool by folate
THI_2678 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thi04147
]
THI_2678 (lpdA)
Enzymes [BR:
thi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
THI_2678 (lpdA)
Exosome [BR:
thi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
THI_2678 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Biotin_lipoyl_2
Thi4
GIDA
FAD_binding_2
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
HI0933_like
DAO
GCV_H
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CAZ89294
UniProt:
D6CVH5
LinkDB
All DBs
Position
complement(2628646..2630466)
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AA seq
606 aa
AA seq
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MAIIEVKVPDIGDFKDVEVIEVLVKAGDQIAVDQSLVTVESDKASMEIPSSAAGVVKALR
VKLGDKVNEGTVLLELDAAGAQAIAETTPAPPAPPAPAAAPTNTAPQTSPAPQAADAFSG
KVDVECDVLVLGAGPGGYSAAFRAADLGLKVVLVERYAALGGVCLNVGCIPSKALLHVAA
VMDEAAHFADLGVEFGAPKVDRAKLAAHKAKVVGKLTGGLAAMAKMRKVTVVRGYGAFID
AHHVQVELTEGEGQNKTGATQTVGFQRAIIAAGSQAVRLPFLPDDPRIVDSTGALTLEQA
PKKMLIVGGGIIGLEMGTVYSTLGARLDVVEMLDGLMLGADRDLVKVWQKLNAKRFDRMM
LKTKTVAAQAKPDGIWVTFEGEGAPTEPQRYDLVLQAVGRAPNGRKIAADKAGVAVNERG
FIPVDAQLRTNVPHIHAIGDIVGQPMLAHKAVHEGHVAAEVCAGELKGDDVLAKSAFDAR
VIPSVAYTDPEIAWVGLTEDAAKAQGIAVTKGLFPWTASGRAIANGRDEGFTKLLFDKAT
HRIVGGGIVGTHAGDLISEIALAIEMGADAVDIGRTIHPHPTLGESVGLAAEAAEGSCTD
LPPPRR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccatcatcgaagtcaaggttcccgatatcggggacttcaaggatgtggaagtgatc
gaggttctggtgaaagccggagaccagatcgcggtcgatcaatcgctggtcacggtggag
agtgacaaggccagcatggagatccccagcagcgccgctggcgtggtgaaggcgctgcgc
gtgaaactgggcgacaaggtaaacgaaggcacggttttgctggaacttgacgctgcgggt
gcgcaggcaatcgccgagactacgcccgcgccgcccgcgccgcccgcgcctgctgccgcg
ccgacaaacacggcgccacaaacctcacccgcgccgcaggctgccgacgcgttctctggc
aaggtcgatgtggagtgcgacgtgttggtgctcggcgctggccccgggggatattccgcc
gcatttcgcgccgccgacctgggcctgaaggtggtgctggtcgagcgttacgccgctttg
gggggcgtgtgcctcaacgtcggctgcatacccagcaaggcgctgctacacgtggccgcg
gtcatggacgaagcggcgcatttcgccgacctcggcgtggaattcggcgcgcccaaggtc
gatcgcgccaagctggcggcgcacaaggccaaggtggtgggcaagctcaccggcggtctg
gcggccatggcgaaaatgcgcaaggtcaccgtcgtgcgcggctatggggcgttcatcgac
gcgcaccatgtgcaggtcgaactcaccgagggcgagggtcaaaacaagaccggcgccacg
cagacggtgggctttcagcgcgccatcatcgccgcaggttcgcaggcggtgcgcctgccc
ttcttgcccgatgacccgcgcatcgtcgattccaccggtgcgctcaccctggagcaggcg
ccgaagaagatgctcatcgtcggcggcggcatcatcgggctggagatgggcacggtgtat
tccacgctgggcgcgcgcttggatgtggtggaaatgctcgacggcctcatgctcggcgcc
gaccgcgatctggtgaaggtctggcagaagctcaacgccaagcgcttcgaccgcatgatg
ctcaagaccaagacggtggccgcccaagccaagcccgacggcatctgggtgacgtttgag
ggcgaaggtgctcctaccgagccgcagcgctacgacctggtgctgcaagccgtgggccgc
gcgcccaatggccgcaaaatcgcggccgacaaggccggcgtggcggtgaacgagcgcggc
ttcattccggtggatgcgcagttgcgcaccaacgtgccgcatatccatgccattggcgac
atcgtcggccagcccatgctggcgcacaaggcggtgcacgagggccatgtcgccgccgag
gtgtgcgcgggcgaactcaaaggcgacgacgtgctggcgaagtcggccttcgacgcgcgg
gtgattcccagcgtggcctataccgatccggagatcgcctgggtcggcctgaccgaagac
gcagccaaagcgcaaggcatcgccgtgaccaaggggctgtttccgtggacggcatcgggt
cgggccatcgccaacgggcgtgatgagggtttcaccaagctgttgttcgataaggcgacg
caccgcatcgtcggcggcggtattgtcggcacccacgcgggcgaccttatcagcgaaatc
gccctggcgatcgagatgggggcggacgcggtggacatcggccgcaccatccatccgcat
cccacactgggcgaatccgtgggtctggcggctgaggcggcagagggcagctgtaccgat
ctgccgccgccacggcgataa
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