KEGG   Thiomonas arsenitoxydans: THI_2815
Entry
THI_2815          CDS       T02347                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)]
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
thi  Thiomonas arsenitoxydans
Pathway
thi00740  Riboflavin metabolism
thi01100  Metabolic pathways
thi01110  Biosynthesis of secondary metabolites
thi01240  Biosynthesis of cofactors
thi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:thi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    THI_2815 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    THI_2815 (ribD)
Enzymes [BR:thi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     THI_2815 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     THI_2815 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CAZ89425
UniProt: D6CLJ7
LinkDB
Position
2759635..2760798
AA seq 387 aa
MSPDDVSFSEQDQRFMRRALDLAHSAMYRTSPNPRVGCVLVRDGQVLGEGATLAAGQDHA
EVQAVKQAWERGHEVRGATAYVTLEPCAHHGRTPPCADLLATQGVARVVAALVDPNPLVA
GQGLQRLRDAGIQVDVGLFADEAREINLGFISRMVRGTPWVRLKVAASLDGVTALPNGTS
QWITSEAARADGHHWRARACAVLTGLGTVRADDPQLNVRAVQTPRQPIRIVVDSRLECPA
TVRLLQSADSPLWIVHALPPEQAAPRLAALRSAATASLDLQDIALPVDPDKPGKTDLRAL
MQVLGQRGINELHCEAGEKLNGSLLRAGVVDELLMYLAPQLLGEGAGLAALGPYQQVNEG
LALRWHDVQRIGADLRILARFPPSFSP
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgagcccggacgacgtttcattcagcgaacaagaccagcgcttcatgcgccgggcgctc
gatctggcgcacagcgcgatgtaccgcaccagccccaatccgcgggtgggctgcgtgctg
gtgcgagacggccaggtgctgggcgaaggcgccacgctggcggcggggcaagaccatgcc
gaagtccaggcagtgaagcaagcctgggagcgcggccacgaggtgcggggcgccaccgcc
tacgtcacgctagagccctgcgcgcaccacggccgcacgccgccctgcgccgacctgctg
gccacgcaaggcgtcgcgcgcgtggtcgctgcgctggtcgatcccaacccgctggtggca
ggccagggattgcagcgtttgcgcgatgccggcatccaggtcgatgtcgggctgttcgcc
gatgaagcgcgcgagatcaaccttggcttcatctcccgcatggtgcgcggcacgccctgg
gtgcggctgaaggtggccgcctcgctcgacggcgtcacggccctgcccaacggcacaagc
cagtggatcaccagcgaagcggcccgcgccgacggtcaccactggcgcgcgcgcgcctgc
gccgtgctcactggcctggggacggtgcgggcggacgatccccagctcaatgtgcgggcg
gtgcagacgccgcgccagcccattcgcatcgtcgtcgacagccgcctggaatgcccggcg
accgtgcgcctgttgcagagcgccgactcgccgctgtggatcgtccacgccctgccgccg
gaacaggccgcgccgcgtctggcggcgctgcgcagcgcggccaccgcctcgctcgatctg
caagacatcgccctgcccgtcgatcccgacaagccgggcaagaccgatttgcgcgcgttg
atgcaggtgctcggccagcggggcatcaacgagctgcactgcgaggccggcgaaaagctc
aacggctcgctgctgcgcgctggcgtggtcgatgaactgctgatgtatcttgcaccccag
ttgctgggcgagggcgccggattggcggcgctggggccctatcagcaggtcaacgaagga
ctcgcgctgcgatggcacgatgtgcagcggatcggcgccgatctgcgcatcctcgctcgt
ttccctccttcattttctccttga

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