Thiomonas arsenitoxydans: THI_2955
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Entry
THI_2955 CDS
T02347
Symbol
cafA
Name
(GenBank) Ribonuclease G (RNase G) (Cytoplasmic axial filament protein)
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
thi
Thiomonas arsenitoxydans
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thi03019
]
THI_2955 (cafA)
03009 Ribosome biogenesis [BR:
thi03009
]
THI_2955 (cafA)
Messenger RNA biogenesis [BR:
thi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THI_2955 (cafA)
Ribosome biogenesis [BR:
thi03009
]
Prokaryotic type
rRNA processing factors
THI_2955 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Phasin_2
Exotox-A_cataly
Motif
Other DBs
NCBI-ProteinID:
CAZ89561
UniProt:
D6CLY3
LinkDB
All DBs
Position
2898719..2900224
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AA seq
501 aa
AA seq
DB search
MNPTPEDILINITPQETRVALVAHAAVQELHIERSLERGLVGNIYLGKVARVLPGMQSAF
IDIGLERTAFLHVADLWQRQAIPVPTEAASEAATAPPLQPIEKLIYEGQTLMVQVLKDPI
NTKGARLTTQISLAGRMLVHLPQDNHIGISQKIDGAELRTALRERMTALLATDAGDAQGF
IVRTNAEDASDAELAEDIAYLRKTWAAIQQRAHVTSPSALIYQELSLAQRVLRDLVSDAT
RSVQIDSRENFELLQSFAAEYMPRVSGRLQLYRGERPLFETANVDEEIERALGRRVDLKS
GGYLIIDQTEAMTTIDVNTGGFVGARNFDDTIYRTNLEATQAIARQLRLRNLGGIIIIDF
IDMHNAQHRAAVLDELRKSLARDKVKVTVSGFSQLGLVELTRKRTRDSLAHMLLEPCPTC
GGLGQVKTARTVCYEILREILREAKQFNPREFRIVGAADVIDLFLEEESQHLASLSDFIG
KPVSLQVEPAFSQQQYDIVLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgacgcccgaagacattctcatcaacatcaccccgcaggaaacccgggtcgcc
ttggtggcccacgccgcggtgcaggaactgcacatcgaacgcagcctggaacgcgggctg
gtgggcaatatctatctgggcaaagtggcgcgggtgctgcccggcatgcagtccgccttc
atcgatatcggcctggagcgcacggcctttttgcatgtggccgacctatggcagcgccag
gccattcccgtgcccaccgaggccgccagcgaagcggcgacagcaccgccccttcagccc
atcgaaaagctgatctacgaaggccagacgctgatggtgcaggtgctcaaagacccgatc
aacaccaagggcgcgcgcctgaccacgcagatcagcctggccggacgcatgctggtgcat
ctgccgcaagacaaccacatcggcatttcgcaaaaaatcgacggcgcagagctgcgcacc
gcgttgcgcgaacgcatgaccgccctgctggcgacggatgccggcgatgcgcaaggcttc
atcgtgcgcaccaatgccgaagacgccagcgacgcggagctggccgaagacatcgcctac
ctgcgcaagacctgggccgccattcagcagcgcgcccacgtcaccagccccagcgccctg
atctaccaggaactcagcctggcgcagcgggtgctacgcgatctggtgagcgacgccacc
cgcagcgtgcagatcgactcgcgcgaaaacttcgagctgcttcagagcttcgccgccgaa
tacatgccccgggtcagcggccgcctgcagctctaccgcggcgagcgcccgctgttcgag
acggcgaacgtggacgaggaaatcgagcgcgcgctggggcggcgagtcgacctcaaatcc
ggcggctacctcatcatcgaccagaccgaggcgatgaccaccatcgacgtcaacaccggc
ggtttcgtcggcgcgcgcaacttcgacgacaccatctaccgcaccaatctggaggccacg
caagccatcgcccgccaactgcggctgcgcaatctgggcggcatcatcatcatcgacttc
atcgacatgcacaacgcccagcaccgcgccgccgtgctcgacgaactgcgtaaatcgctg
gcgcgcgacaaggtgaaggtcaccgtcagcggcttctcgcaactcggcctggtggaactc
acccgcaaacgcacccgcgactcgctggcgcacatgctgctggagccctgccccacctgc
ggcgggctgggtcaagtgaaaaccgcgcgcaccgtgtgctatgaaatcctgcgggaaatt
ctgcgcgaggccaaacaattcaacccgcgcgagttccgcatcgtcggcgccgccgacgtc
atcgacctgttcctcgaagaagaaagccagcatctggcctcgctctccgacttcatcggc
aagcccgtgtcgctacaggtcgagcccgcgttttcgcagcaacagtacgacatcgtgctg
acctga
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