Thiomonas arsenitoxydans: THI_3012
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Entry
THI_3012 CDS
T02347
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THI_3012 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thi03021
]
THI_3012 (rpoA)
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_3012 (rpoA)
Enzymes [BR:
thi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THI_3012 (rpoA)
Transcription machinery [BR:
thi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THI_3012 (rpoA)
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THI_3012 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CAZ89617
UniProt:
D6CM39
LinkDB
All DBs
Position
complement(2959700..2960686)
Genome browser
AA seq
328 aa
AA seq
DB search
MQTALLRPKSIQVESLGHNRSKVVLEPFERGYGHTLGNALRRVMLSSLVGYAPTEVSING
VLHEYSVVDGLQEDVIGVLLNLKGVVLKLHNRDEVTLSLRKEGEGVVTAADIQTPHDVEI
INPDHVIAHLSQGGKLDMQIKVEKGRGYVPGTLRNFGEEGGKSIGHIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMEIETNGVISAEEAIRSSARILVEQLSVFASLEGAETTEAAE
AAAGGQTYDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRSETELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLDNWPPSGLDKR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgcacttcttcgccccaagtcgattcaggtcgaatctctcggtcacaatcgt
tccaaagtggtgctcgaacctttcgagcgcggctacggacacacccttggcaacgccctt
cgtcgcgtcatgctgtcgtcgctggtgggttacgcgccgaccgaggtcagcatcaacggc
gtgctccacgaatactctgtggtcgacggcctgcaggaagatgtgatcggcgtgctgctc
aacctcaagggcgtggtgctcaagctgcacaaccgtgacgaagtcaccctgtcgctgcgc
aaggaaggcgaaggcgtggtgactgctgccgacattcagacgcctcacgacgtcgagatc
atcaatccggatcacgtgatcgcgcatctgtcgcaaggcggcaagctcgacatgcagatc
aaggtcgaaaagggtcgtggctacgtccccggcaccctgcgtaatttcggcgaagaaggc
ggcaagagcattggtcatatcgtgctcgacgcttcgttctcgccggtgcgccgcgtcagc
tatgccgtggaaagcgcccgcgtggagcagcgtaccgatctggacaagctggtcatggaa
atcgagaccaacggcgtcatcagcgcggaagaagccattcgttcgtctgcgcgcattctg
gttgagcagttgtcggtgttcgccagcctggaaggtgccgagacgaccgaggccgccgag
gcggctgcgggtggacagacctacgatccgattctgctgcgcccggttgatgagctcgaa
ctgacggtgcgctcggccaattgcctcaaggccgagaacatttattacatcggcgacctg
attcagcgtagcgaaaccgaactgctcaagacccccaacctgggccgcaagtcgctcaac
gaaatcaaggaagtgctcgccgcgcgcgggctgacgctgggcatgaagctcgacaactgg
ccgcccagcggcttggacaagcgctga
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