Thiomonas arsenitoxydans: THI_3189
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Entry
THI_3189 CDS
T02347
Name
(GenBank) putative exodeoxyribonuclease V, gamma subunit recC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THI_3189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_3189
Enzymes [BR:
thi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
THI_3189
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THI_3189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAZ89787
UniProt:
D6CMK9
LinkDB
All DBs
Position
3104719..3108240
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AA seq
1173 aa
AA seq
DB search
MTDDIRPGLFILQGNRLELLRDALLEWLAQQPLAPLEEEVILVQSNGAAEWLKMALAAQG
GICAATRVELPGRFLWRTYRQVLGRAATPSQSPLDKPLLTWRLMRLLGAPRAELSPARPP
WESRKLGAAQRFLEGGTLDADVCAPLLQYLQGQDLLRRLQLAQRLADLYDQYQIYRDDWL
DAWAQGRDVLIDALGRATPLPEDQRWQAWLWRRVLAELSETERQSTRAQVQRAMLQALHT
AESAADPTRPALPRRVVLFGASHLPAVVLDALVALSRYVQVLIALPNPCRYHWADIIEGR
ELLRAAPARRPLRAGDLAQVSLEAMHAHAHPLLAAWGRQGRDFMRQLDAFDEQANAADRP
GLPRHDLFDDAPGDTLLEQVQAAIRDLLPLPEHPRKPISAADRSVVFHIGHSAQREVEIL
HDQLLHLLAQPSGERPLRPRDIVVMTPDIAPFAPAIRAVFGQYPPGDARFIPFDIADLSA
RATEPLLLALDWLLRLPQERILASDISALLDVPAIARRFGLRPEDRPRLTQWIAGAGVRW
GLDVDHRAHLGLGACGEQNSWRFGLRRMLLGYAGAGEDGFENIVPFDEIGGLDAALVGPL
ADLLDVLQAWWRTALQNATPGQWAQHARDLLDAISLPQDLRERETRARLDDALSTWLDHC
AAARFDEAVPLQVLRESWLSGLDEAAGGGRFLAGGVTFCTLMPLRAIPFEVVCLLGMNEG
DYPRRSPRSDFDLLHQPGQYRPGDRARREDDRYLMLEALLSARRMLYVSWAGRSPRDNTE
QPPSVLVAQLRDYLAAGWQGEGQRDLLAQRTTVHPLQPFSRRYFEGDAALFTYAREWRQA
HGGVAENGTGNGNGPMPFEPLTEPLSLQQLARFLKNPVKAFFRTRLDVVFDELQTQDDDE
VFALDGLDRHSLLSHLIDDPQAAVDEGIEAAVARRVRQLQGSGALPLRALGSRVAQGLEQ
EALPLLRSWSELAQAYPQAVDKRALIVEYQDLRLDDWLDGLRTGGQSPIWMQLSASRLSD
GKAQARAEKLIDAWVRQLAASACGHAVQGVLIGADARVDLPPLPAAEARDRLHTLLAAWQ
EGMRRPLPFTARTALAELKNGKGQEAYEGGYCTSGEVEEPCLARTFPDFASLSADGRFET
YLAELFRPLADWAAQAVVIRHGQTPAAGTKEAA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgatatccgccccggcttgttcattctgcagggcaatcgcctggaattgctg
cgcgatgccctgctggaatggctggcgcagcagccgctggcgccgctggaggaagaggtc
attctggtgcagagcaatggcgctgcggagtggctgaaaatggcgctggccgcgcagggc
ggcatttgcgccgctacgcgggtggagctgcccggaaggtttctgtggcgcacctatcgg
caggtgctcgggcgtgcggccacgccgtcgcaatcgccgctggacaagccgctgctgacc
tggcgcctgatgcgacttctgggtgcccccagggccgagctaagcccggcccgccccccg
tgggagtcaaggaaacttggggcggcccagcgtttccttgagggcggcacgctcgatgcg
gacgtttgcgcgccgctgttgcaatatctgcagggtcaagacctgctgcgccgcctgcaa
ctggcgcagcgtctggccgacctctacgaccagtatcagatctaccgcgacgactggctc
gacgcctgggcacagggccgcgatgtgctcatcgacgcgctcgggcgcgcgacgcccttg
cccgaagatcaacgctggcaggcctggctgtggcgccgggttctggccgagctgagcgaa
acggagcgtcaatccacccgtgcgcaggtgcagcgcgccatgctgcaggcgctgcatacc
gccgaaagcgcagccgacccgacccgacccgcgctgccgcgccgggtggtgctgtttggc
gcttcgcatctgccggccgtggtgctcgatgcgctggtggcgctgtcgcggtatgtgcag
gtgctgatcgcgctgcccaatccctgccgttatcactgggccgacatcatcgagggccgc
gagctgctgcgcgcagcaccggctcgcaggccgctgcgggcgggcgacctggcgcaggtc
agtcttgaggccatgcacgcccacgctcacccgctgctggcggcctgggggcggcaggga
cgcgatttcatgcgccagctcgacgccttcgacgagcaggcgaacgcggcagacaggccc
ggcctgccgcggcacgacctgttcgacgacgcgcccggcgacacgctgctcgaacaggtg
caggccgccatccgcgatctgctgcccttgcccgaacatccgcgcaagcccatttccgca
gcggatcgttcggtggtgtttcacatcggccacagcgcgcagcgcgaagtcgaaatcctc
cacgaccagttgctgcacctgttggcgcagcccagcggcgagcgaccgctgcggccgcgc
gacatcgtggtgatgacgcccgatatcgccccgttcgccccggccatccgggcggtgttc
ggccagtatccgccgggggatgcgcgcttcattcccttcgacatcgccgacctgtcggcg
cgggcgaccgaaccgctgctgctcgcgctggattggctgctgcgcctgccgcaagagcgc
attctggcctccgacatcagcgccttgctcgatgtaccggccattgcccggcgcttcggc
ctgaggcccgaagaccggccaaggctgacgcaatggatcgccggcgcgggcgtgcgctgg
gggctggacgtcgaccatcgcgcccatctcggcctgggcgcctgcggcgagcagaacagc
tggcgcttcggcctgcgccgcatgctgctgggctatgccggggcgggcgaagacggcttt
gagaacatcgtgccctttgacgaaatcggcgggctggatgccgccctcgtcggcccgctg
gccgatctgctcgacgtgctgcaagcctggtggcgcacggccttgcaaaacgccacgccg
ggccagtgggcgcagcacgcgcgcgatctgctcgacgccatcagcctgccgcaagacctg
cgcgagcgcgaaacccgcgcccgcctcgacgatgcgctctccacctggctcgaccattgc
gccgccgcgcggttcgacgaagccgtgccgctgcaggtgctgcgcgagagctggctgagc
gggctggacgaggccgcgggcggcgggcgctttctcgccggtggggtgaccttctgcacc
ctgatgccgctgcgcgccattcccttcgaagtcgtctgcctgctgggcatgaacgagggc
gactacccgcgccgcagcccgcgcagcgacttcgatctgctgcatcagcccgggcaatac
cggcccggagatcgcgcccggcgcgaagacgatcgctacctcatgctcgaagcgctgctg
tcggcgcgccgcatgctctatgtgagctgggctggccgcagcccgcgcgacaacaccgag
cagccgccgtcggtgctggtggcgcagttgcgcgactatctcgccgcgggttggcaaggc
gaaggacagcgcgatctgctcgcgcagcgcaccaccgttcatcccctgcaacccttcagc
cgccgctacttcgagggcgacgccgcgctgttcacctatgcccgcgagtggcggcaggcg
catggcggcgtggccgagaacgggaccgggaacggaaatgggccgatgccgttcgagccg
ctcaccgaaccgctgagtctgcagcaactggcccgcttcctgaaaaatccggtcaaggcg
tttttccgcacccggctcgacgtggtgttcgacgaactgcagacgcaggacgacgacgaa
gtcttcgcgctcgacgggctcgaccgccacagcctgctcagccacttgatcgacgatccg
caggccgccgtggatgagggcatcgaggccgccgtcgcgcgccgggtgcgccagttgcag
ggcagcggggcgctgcccctgcgcgcgctgggcagcagagtggcgcaaggtctggagcaa
gaggcgttgccgctgctgcgcagttggtccgagctggcgcaggcctatccgcaggcggtg
gacaagcgggcgttgatcgtcgagtaccaagacctgcggctggacgactggctcgacggc
ttgcgcacaggaggccaaagcccgatctggatgcagctcagcgcttcgagactgagcgat
ggcaaagcgcaggcgcgcgctgaaaagctgatcgacgcctgggtgcggcagttggcggcc
agcgcctgcggtcatgcggtgcagggcgtgctcattggcgccgatgcgcgggtggatctg
ccgccgctgcccgcggctgaggccagagatcgccttcacaccctgctggccgcctggcaa
gagggcatgcgccgcccgctgccgttcaccgcccgcaccgccttggccgagctgaaaaat
ggcaaggggcaagaggcctatgagggcggctattgcacttcgggtgaagtcgaggagccc
tgcctcgcccgcaccttccccgactttgccagcctgagcgccgatgggcgcttcgagact
tacctagccgagctgttccggcccttggcagactgggcggcgcaggccgttgtcatccgc
cacggccagacgcccgctgcgggcacgaaagaagccgcatga
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