Thiomonas arsenitoxydans: THI_3191
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Entry
THI_3191 CDS
T02347
Name
(GenBank) putative exodeoxyribonuclease V, alpha subunit recD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THI_3191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_3191
Enzymes [BR:
thi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
THI_3191
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THI_3191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_16
Mg_chelatase
DEAD
AAA_5
nSTAND3
UvrD_C
DO-GTPase1
NACHT
PhoH
AAA_28
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAZ89789
UniProt:
D6CML1
LinkDB
All DBs
Position
3111842..3113917
Genome browser
AA seq
691 aa
AA seq
DB search
MRPAPTNAPNAPTQRVLDVLHDWAEQGVLRRLDAALARFLAELCPQMPPELAVAVALLAD
LEGRGHTCVLLGELPQHFIALKERAATAGAPALSPDVHWPNDGERLLRECPAVYCEGEPD
HGAPLIFSRERRAAPSSLDPLGGRGGRSTTLGAMEAERLYLRRYWRDENTVAARIHQRLQ
PEATVDAPAAAALLARLFPPADDTEVDWQKLACALALRGRFTLLTGGPGTGKTHTAARLL
ALLWALRSQPGALRVALAAPTGKAAARLKQSIDRELVKLAALPGVAELSQRLGPARTLHS
LLGARPDTRRFARNAAQPLEVDVLLVDEASMIHLEMMAALLDALPPTARLILLGDKDQLA
SVEAGAVLGELCTGAQQGRYTPQTAQALQALCGDRIPQPFIDPTGPALLQRVVMLRKSHR
FGGAIGQLAQAVNAGDAERAQALLQQTDGAAVRLLPVPQLLAPVFSPVSAPVAAPALVDL
AVQGRDGAKGYAHYADLLRQGPTAEADWDAWAQRVLQAFDQCRVLCAVREGPWGVQALNE
AIAARLDALGLLHGRGAWYAGRPVMVTRNDHDLGVLNGDVGIALPTGTQGLRGVFLQGQS
LRSVSISRLADVQTAFAMTVHQSQGSEFDHTVLVLPERHAGLSRELIYTGITRARRFFTL
ACADMQTLHEGIQRVTQRASGLLSRIDKLPA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgccccgaccaacgcgccgaatgcgccgacccagcgcgttctcgacgtgctg
cacgactgggcagagcaaggcgtgctgcggcggctggacgctgcgctggcccgcttcctg
gctgaactctgcccgcaaatgccgccagaactggcggtagccgtggcgctgctcgccgat
ctggaggggcgcggtcatacctgcgtgctgctgggcgaattgccgcaacacttcatcgcc
ttgaaagagcgcgccgccacggcgggcgcgcctgccctgtcgcccgatgtgcactggccc
aacgacggcgagcgcctgctgcgcgagtgcccggccgtttactgcgagggcgagccggac
cacggcgcgccgctgatattctcaagggaacgcagggccgccccaagttcccttgacccc
ctcggggggcggggcgggcgtagcacgaccctgggggcgatggaggcagagcggctgtat
ctgcgccgctactggcgagatgagaacaccgtggccgcacggattcaccagcgcctgcag
cctgaagccacggtcgatgcacccgctgctgcagcgctgctggcacggcttttcccgcct
gccgacgatacggaagtggactggcagaaactggcgtgcgcgctggcgctacgcggacgt
ttcaccctgctcaccggcggtcccggtaccggcaaaacacatactgcggcgcggctgctg
gctttgctgtgggctttgagatcccaacccggcgcgctgcgcgtggcgctggcggccccc
acgggcaaggccgcagcccggctcaagcagtccatcgaccgcgagctcgtcaagctcgcc
gccctccccggcgtggccgaactgtcgcagcgcctcggccctgcacgcaccctgcacagc
ctgctcggcgcgcggcccgatacccgccgcttcgcccgcaacgccgcgcagcccttggag
gtggatgtgctgctggtcgatgaggcgtccatgattcatctggaaatgatggccgcgctg
ctcgacgccttgccgcccacggcacggctcattttgctgggcgacaaggatcagctcgct
tcggtggaagccggtgcggtgctcggcgagctgtgcaccggggcgcagcagggccgctac
acgccgcaaacggcgcaggcgctgcaggctctgtgcggcgaccgtattcctcagcccttc
atcgaccccaccggccccgcgctgttgcagcgggtggtgatgttgcgcaaaagtcatcgc
ttcggcggcgccatcgggcaactggcccaggcggtgaacgcgggcgacgccgagcgggcg
caggcgctgctgcagcagaccgacggtgcggcggtgcggctgttgcccgtaccccagttg
ctggcgcccgttttctccccggtttcagcccctgttgcagccccggcgctggtcgatctt
gcggtgcagggtcgtgatggcgccaagggctatgcccactacgccgatttgctgcggcag
gggccgacggctgaggcagattgggacgcctgggcgcagcgcgtgctgcaagctttcgat
cagtgccgcgtgctgtgcgcggtgcgcgaagggccttggggcgtgcaggcgctgaacgag
gccatcgccgcgcggctggacgcgctcggcctgctgcacggtcgcggcgcgtggtacgcg
ggtcgcccggtgatggtcacgcgcaacgatcacgatctgggcgtgctcaacggcgatgtc
ggcatcgccttgccgaccggcacgcagggcttgcggggggtgtttctgcaggggcagagc
ctgcgctcggtcagcatcagccgtctggccgatgtgcagacggcgttcgccatgacggtg
caccagtcgcaggggtcggagttcgatcacaccgtgctggtgctgcccgagcgccacgcc
gggctcagccgcgagctgatctacaccggcatcacgcgcgcgcgccgctttttcaccctg
gcctgcgcagacatgcagacgctgcatgagggcatccagcgcgtcacgcaacgggccagc
ggattgctctcgcgcatcgataaactgcctgcatga
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