Thiohalobacter sp. COW1: TspCOW1_00120
Help
Entry
TspCOW1_00120 CDS
T08363
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_00120
Enzymes [BR:
thic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TspCOW1_00120
DNA repair and recombination proteins [BR:
thic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TspCOW1_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCO29909
UniProt:
A0A7R7GJF9
LinkDB
All DBs
Position
complement(13130..16537)
Genome browser
AA seq
1135 aa
AA seq
DB search
MTSPPNPSLDAARPAANATVHASAGTGKTWLLVTRLVRLLLDGAEPGRILAVTFTRKAAA
EMLERLTERLRLLATVPDADLDPLLAQMGVAPEPELRRQARRLYETLLRADFNLRATTFH
SVCQEILQRFPLEAGVPPGFELLEAEGDARDAAWDALYAEATAAPEGDIGRALDTLMDGC
GGLGSVQTALGSFLAHRIDWWAYTDGRDDPAAWAGERLREQLDIDADSDPERSFFNDLTC
QRLQQFRDLLLLHPTATHKKQAAAIAAALNTGTPAPARIEALWPALLTQKGEPLSRKASK
TLESKLGADGMERLLELHTQLCEQFLDLLDARQRRANWQLNRAWYHAGARLLEQFQAIKR
NQRQLDFSDLEWHAYQLLNRSEQAHWVQYKLDNRIDHLLVDEFQDTNPTQWRLLLPLLEE
LAAGSERPRSVFLVGDEKQSIYRFRRADSRLLGAASQWLEQHLASRRHSLTHSRRSAAAV
IDCVNRVFAQPELRSRMPHFEPHGTFHPDLWGRVEVLPLIQPGTVDEDGEEQPASDASTL
RDPLRQPRELPLDERYYREGRQAAERIQTLIAGGCLLEEGDRARPVRYGDILILLRSRTH
AADYERALRDAGIPCLGTSRGALLDSLEARDLEALLQTLIAPHNNLALAQVLRSPLFAAT
DADLVRLAGLKQGDWMARLSALADDPATPEALRRAADCLPRWGERVGRLPVHDLLDRIFF
EGDVLARYAAATPTALRPQVLANLQRFLELALEIDSGRYPSLPRFLQQLSRLRERSDEAP
DDAPPAAGDRVRMLTIHGAKGLEAPVVLLLDAAAAERDRSAWQALVDWPASEARPSYFLL
NPGQARRDRISRDWQAAQQQAETREDANLLYVALTRARQLLIVSGTAPARGSGSGWHGLI
RTGLAPETEALDTPLVLETGVAPAAAASVATPAGAEPPAPDPRLARPLELSLPRDRLAPS
RGNETIADSEGFDADGRLRGQAVHLLLEWLSAPAPITAGIALQRLAAWAGRDAGEDDLQA
WLAEARAVLAHPGLADLFDPARYETAWKEMPLHYLDNGVLVEGIVDRLVRRADRLLLIDY
KTHRLGTAPAAQHAASFQGQMRYYAAGARRLWPQLPIECGILYTHSRELVLLDID
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccccccgaacccttccctggatgcggcccggccggcggccaacgccaccgtc
catgcctcggccggcaccggcaagacctggctgctggtcacccgactggtacggctgctg
ctggacggggccgagccgggccgcatcctggcggtgaccttcacccgcaaggccgccgcc
gagatgctggagcggctcaccgaacgcctgcgtctgctggccacggtgccggacgccgac
ctcgatccgctgctggcgcagatgggcgtggcgcctgaaccggaacttcgccggcaggcc
cgccggctctatgagaccctgctgcgcgccgacttcaacctgcgcgccaccaccttccat
tcggtctgccaggagatcctgcagcgcttcccgctggaggccggggtgccgccgggcttc
gagctgctggaggccgagggcgacgcccgcgacgccgcctgggatgccctctatgccgag
gccaccgccgcgcccgagggcgacatcggacgggccctggacacgctgatggacggctgc
ggcggtctgggcagcgtgcagacggcgctgggcagtttcctcgcccaccgcatcgactgg
tgggcctacaccgatggccgggacgacccggccgcctgggccggggagcggctgcgcgaa
caactcgatatcgatgcggacagcgacccggaacggagcttcttcaacgacctgacctgc
cagcggctgcagcagttccgcgacctgctactgctgcatccgaccgccacccacaagaaa
caggcggcggccatcgctgccgccctcaacaccggcacaccggcaccggcacgcatcgag
gccctgtggccggcgctgctgacgcagaaaggcgaaccgctcagccgcaaagccagcaag
acgctggaaagcaaactcggcgctgacggcatggaacggctgctggaactgcatacccag
ctgtgcgagcagttcctcgacctgctcgacgcccgccagcgccgtgccaactggcaactc
aatcgcgcctggtatcatgccggcgcccggctgctggaacagttccaggccatcaaacgc
aaccagcgccagctggacttcagcgacctggaatggcacgcctatcagttattgaaccgc
agcgagcaggcgcactgggtgcagtacaagctggacaaccgcatcgatcacctgctggtc
gacgagttccaggacaccaaccccacccagtggcgcctgctgctgccgctgctggaggaa
ctggccgccggcagcgagcggccgcgcagcgtgttcctggtcggtgacgaaaagcagtcc
atctaccgcttccgccgcgccgattcgcgcctgctcggcgcggccagccagtggctggaa
cagcatctcgccagccgccgccacagcctgacgcactcgcggcgctcggccgcggccgtc
atcgactgcgtgaaccgggtcttcgcccagcccgaactgcgcagccgcatgccgcacttc
gaaccgcacggcaccttccatcccgacctgtggggccgggtcgaggtactgcccctgatt
cagcccgggacggtggatgaagacggggaggaacagcccgcgtcagacgcatccaccctg
cgcgacccgctgcgccagccgcgggaactgccgctggatgagcgctactaccgcgaaggc
cgccaggccgccgagcgcatccagacgctcatcgccggcggctgtctgctggaggaaggc
gaccgggcccgccccgtgcgctacggcgacatcctgatcctgctgcgcagccgcacccat
gccgccgactacgagcgcgccctgcgcgacgccggcatcccctgcctgggcacctcccgc
ggcgccctgctcgacagcctggaggcacgcgacctggaggcgctgctgcagaccctgatc
gcgccgcacaacaacctggccctggcccaggtgctgcgctcgcccctgtttgccgccacg
gatgccgatctggtccgcctggccggactgaagcagggcgactggatggcccggctgagt
gcactggccgatgatccggccacgccggaagccctgcgccgggccgccgactgcctgccg
cgctggggcgaacgggtcggacggctgccggtgcatgacctgctggaccggatcttcttc
gaaggggacgtgctggcgcgctacgccgcggccacccccacggcgctgcgcccacaggta
ctggccaacctgcagcggttcctggaactggcgctggaaatcgacagcggccgctacccc
agcctgccgcgcttcctgcagcagctgagccgcctgcgcgaacgcagcgacgaggccccg
gacgacgccccgccggcggcgggcgaccgggtgcggatgctcaccatccacggcgccaag
ggcctggaggcaccggtggtactgctgctggatgccgccgcggcggaacgcgaccgcagc
gcctggcaggcgctggtggactggccggcaagcgaagcgcgccccagttatttcctgctc
aacccgggccaggcgcggcgcgaccgcatcagccgcgactggcaggcggcgcagcagcag
gccgagacgcgcgaagacgccaacctgctgtacgtggccctgacccgggcccggcagctg
ctgatcgtctccggcaccgccccggcgcgcggcagcggcagcggctggcacggcctgatc
cgcaccgggctggcaccggagacggaagccctcgacacgccgctggtgctggaaaccggc
gtggcgccggccgcggcggcaagcgtggcaacgccggccggggccgaacccccggccccg
gacccgcgcctggcccgaccgctggaactctccctgccgcgcgaccgactggcgccgagc
cggggcaacgagaccatcgccgacagcgaggggttcgatgccgacggccgcctgcgcggc
caggcagtgcacctgctgctggaatggctgagcgcgccggcaccgatcaccgcagggatc
gccctgcagcggctggccgcctgggcgggccgggatgccggggaggacgacctgcaggcc
tggttggccgaggcccgcgccgtgctcgcccaccccgggctggccgacctgttcgatccg
gcccgctatgaaacggcctggaaggagatgccgctgcactatctggacaacggcgtgctg
gtcgagggcatcgtcgaccggctggtgcgccgggccgaccggctgctgctcatcgattac
aagacccatcggctgggcaccgcgccggccgcgcaacatgccgcgtccttccagggccag
atgcgttactatgccgccggcgcgcggcgcctgtggccgcagctgccgattgaatgcggt
atcctctacacccattcgcgcgaactggtgctgctggatatcgattga
DBGET
integrated database retrieval system
