Thiohalobacter sp. COW1: TspCOW1_00140
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Entry
TspCOW1_00140 CDS
T08363
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_00140
Enzymes [BR:
thic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TspCOW1_00140
DNA repair and recombination proteins [BR:
thic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TspCOW1_00140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
BCO29911
UniProt:
A0A7R7GHW3
LinkDB
All DBs
Position
complement(16910..19804)
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AA seq
964 aa
AA seq
DB search
MHTSPVSTVQRHPWHTDLLAAAAHAIVARWGEHLPDLSRLSVILPQPLAASDLRRRLLAA
LPADGPGSLLGPRLLTLSDYLDTHLDAPQPVWSREAGLLALVEALRGHEALFGDEDTWRL
AEHLLELFQELTLNRVELADADGFHRRLGQAYRIAGRPPPALEREAGIVHRLWRAWHEQL
AALQVEDPARARLQCLARAAVPAADELGLVLVGEPDLNSAERAWLAQRLQHPDCLWLRQG
DNTALDALCPGIDIVAGPTPPAARCLDSIYADTGTAPELRRRALEFAAAHPASPLQGQLA
VFGADSAEQEARAIELRIRQWLLAGRRNLGIVTEDRRLARRVRALLERAGVTLNDTGGWA
LSTTSAATVVERWLESVEQDFEHRPLLDFLKSPFASGAEREQHLLQVYRLEQDVILQGRI
ARGIPRYRRQLGTRQELLGDWPAAEYQGLFALLDRLESAAAGLRECLTGRHPAERLLQAL
RDSLDELGVWRALEQDPAGERILRVWERLHSAVNLTPLALDWTEFRTWFGRSLETAHFTP
PGTGGPVRLLSLEQSQGLRFDGLILAACDARHLPGGPPTGPFFNDRVRRELGLPVWRERL
DRRFALFRCLLGAAGQVLLTHRREDQGEPVLPSPWLELLQGFHRLAWNDDLEDTGLAAAL
DQPASRVRPAAPPPLPEPPDRPRPILPAGLRPPRVSASSHQRLIDCPYAWFAADGLGLKP
PEAIREALQKQDYGERVHRCLEAFHGRVRGLPGPFPEPLTAANRDAAITLLDEISQAVFA
RDLEDNFQHRGWLKRWQERIPAYIDWQIERARDWQVEAVEQRIDRTLGPDLVLRGRLDRL
DRGADGLAIIDYKTGRTPDAEQVASGEAVQLPFYRLLLEQPVARSSYLPLDDKDRRMQDR
VALADEDLEQLSRAVQTRLETVTAEIDAGADLPAWGDEQTCRRCEYDGLCRKALWDQQTG
QAPE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcacacatcacctgtatccacggtccagcgccacccctggcacaccgacctgctggcc
gcggccgcccacgccatcgtcgcgcgctggggcgaacacctgccggacctgtcgcggctc
agcgtcatcctgccgcagccgctggcggcctccgacctgcgccgacgtctgctcgcggcc
ctccccgccgacggcccgggcagcctgctcggcccgcgcctgctcaccctgtccgactac
ctcgacacccacctggatgccccgcagccggtctggagccgggaggccgggctgctggcg
ctggtcgaggccctgcgcggccacgaggccttgttcggcgacgaggacacctggcgcctg
gccgaacacctgctggagttgttccaggagttgaccctgaaccgggtcgaactggcggat
gcggacggctttcaccggcgtctggggcaggcctaccgcatcgccggccgccccccgccg
gcactggaacgcgaggccgggatcgtccaccgtctgtggcgggcctggcatgagcagctt
gccgcgctccaggtcgaggatccggcccgggccaggctgcagtgcctggcccgggccgcc
gtgccggctgccgatgaactcgggctggtgctggtcggcgagccggatctcaacagcgcc
gaacgcgcctggctggcgcagcgtctgcagcacccggactgcctgtggctgcgccagggc
gacaacaccgccctggacgccctctgccccggcatcgacatcgttgccggccccacgccg
cctgcggcccgctgtctggacagcatttacgccgacaccgggaccgcaccggagctgcgc
cggcgcgcactggagttcgccgcggcgcatccggcaagcccgctgcaggggcagctggcg
gtattcggtgccgattcggccgagcaggaggcgcgcgccattgaactgcgcatccgccag
tggctgctggcgggccggcgcaacctgggcatcgtcaccgaggaccggcgcctggcgcgg
cgggtgcgcgccctgctggagcgcgccggggtgacgctcaacgataccggcggctgggcc
ctgtccaccaccagcgcggccaccgtggtggagcgctggctggaatcggtggagcaggac
ttcgaacaccggccgctgctggatttcctcaaatcccccttcgccagcggcgccgagcgc
gaacagcacctgctgcaggtctaccggctggagcaggatgtcatcctgcagggccgcatc
gcccgcggcatcccccgctaccgccggcagctgggcacccgccaggaactgctgggcgac
tggccggccgccgagtaccagggcctgttcgccctgctcgaccggctggagtcggccgcc
gcaggcctgcgcgaatgcctcaccggcaggcatcccgccgaacgactcctgcaggccctg
cgcgacagcctggatgaactgggcgtgtggcgcgccctggagcaggacccggcgggcgaa
cgtatcctgcgggtgtgggagcggctgcacagcgcggtgaacctgaccccgctggcactc
gactggaccgagttccgcacctggttcggccgcagcctggagacggcccacttcacgccg
cccggcaccggcggcccggtgcggctgctgtcgctggagcagagccagggcctgcgcttc
gacgggctgatcctggccgcctgcgatgcccggcatctgcccggcggtccgcccaccggc
cccttcttcaacgaccgggtacggcgcgaactgggcctgcctgtgtggcgcgaacgcctg
gaccggcgcttcgccctgttccgctgcctgctcggcgctgccgggcaggtcctgctcacc
caccggcgcgaggatcagggcgagccggtcctgcccagcccctggctggaactgctgcag
ggcttccaccgcctggcctggaatgacgacctggaagacaccgggcttgccgccgcgctc
gaccagcccgccagccgggtccgccccgccgccccgccgccgctgcccgaaccgccggac
cgtccgcgcccgatcctgcccgcgggcctgcgcccgccccgggtcagcgccagcagccac
cagcgcctgatcgactgtccctatgcctggtttgccgcggacggcctgggcctgaaaccg
cccgaggccatccgcgaggcactgcagaaacaggattacggcgagcgcgtgcacagatgt
ctggaggccttccacggccgggtgcgggggctgcccggccccttccccgaaccgctcacc
gcggccaaccgggacgcggccatcaccctgctcgatgaaatcagccaggcggtgttcgcc
cgcgatctggaagacaatttccagcaccgcggctggctcaagcgctggcaggagcgcatt
cccgcctatatcgactggcagatcgaacgggcccgcgactggcaggtcgaggcggtggag
cagcgcatcgaccggacgctgggtccggacctggtgctgcgcggccgcctcgaccgcctc
gatcgcggtgccgacggcctggccatcatcgactacaagaccggccggaccccggacgcg
gaacaggtggcaagcggcgaggcggtgcagctgcccttctaccggctgctgctggaacag
ccggtggcgcgcagcagttacctgccgttggatgacaaggacaggaggatgcaggaccgg
gtcgcgctcgcggacgaggacctggaacaactcagccgggccgtgcagacacgcctggag
acagtgacggcagagatcgatgccggcgccgacctgccggcctggggcgacgaacagacc
tgccggcgctgcgagtacgacggcctgtgccggaaagccttgtgggatcaacagacgggg
caggcgccggaatga
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