Thiohalobacter sp. COW1: TspCOW1_04670
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Entry
TspCOW1_04670 CDS
T08363
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein B
KO
K19804
lipopolysaccharide assembly protein B
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
TspCOW1_04670 (lapB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_7
TPR_14
Zn_ribbon_LapB
TPR_12
ARM_TT21_C
TPR_6
ARM_TT21
NatA_aux_su
TPR_CcmH_CycH
DUF5691
TPR_9
KH_11
HrpB1_HrpK
HemY_N
TPR_21
HypA
DUF6483
NRDD
TPR_IF140-IFT172
TPR_10
ARM_TT21_2nd
Zn_ribbon_8
Iml2-TPR_39
DUF7129
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
BCO30364
UniProt:
A0A7R7GIV3
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All DBs
Position
517283..518449
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AA seq
388 aa
AA seq
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MSALLWLLLPVAAASGWLVALRSERRRQRRPPPELNEHYFKGLNLLLNEQPDKAIEVFVD
MLEVDSDTVETHMALGNLFRRRGEVDRAIRIHQNLIARPTLERDQRNTALLELSRDYMRA
GLFDRAENLLQELLDTSAHAPAALGHLLDIYQQEKEWDKAIQVARRLEGLNGRHMHPVVA
QFHCEQAEQAMRHGDAAGATRLLKRALNHDPNCVRASLLQARLAREAGDHRTAVQVLKRI
EKQDIDFLPEALPELKAGYTALGAQPELMRYLQEIAGRYRGVTPALMLSELIEARDGAAA
AVEYLTAYLRERPSIRGLERMIHLDLGSSEGRAREDLLLLRDLTARLLEDRPRYRCHNCG
FEAKALHWQCPSCKEWNRIKPIYGVEGE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgctgctctggctgctcctgcccgtggctgccgcctccggctggcttgtggcc
ctgcgcagcgaacgccggcgccagcgccgtccccctccggaactcaatgagcactatttc
aaagggctgaacttactgctcaatgagcagcccgacaaggcgatcgaggtgttcgtcgac
atgctggaagtcgacagcgacacggtcgagacccacatggcccttggcaacctgttccgc
cgccgcggcgaggtcgaccgcgctatccgcatccatcagaatctgatcgcccgccccacg
ctggagcgtgatcagcgcaacaccgcactgctggagctgagccgcgattacatgcgtgcc
ggcctgttcgatcgcgccgagaacctgctgcaggagttgctggacaccagcgcccatgcc
ccggccgcgctggggcacctgctggacatctaccagcaggaaaaggaatgggacaaggcg
atccaggtcgcccgccggctggaggggttgaacgggcgccacatgcatccggtagtggcg
cagtttcactgcgagcaggccgagcaggcgatgcgtcacggcgatgccgccggcgccacg
cgcctgctcaagcgggcactcaaccacgatccgaactgtgtgcgtgccagcctcctgcag
gcccgtctggcgcgcgaggcaggtgaccaccgcaccgcggtccaggtgctgaaacgcatc
gagaaacaggacatcgatttcctgcccgaggcgctgcccgaactgaaggcgggctacacg
gcgctgggcgcgcagccggagttgatgcgctatctgcaggagattgccggtcgctaccgg
ggcgtgacgccggcgctgatgctctcggagttgatcgaggcccgcgacggcgccgctgcc
gcagtggaatatctgaccgcctacctgcgtgagcggccctccatccgcggcctggagcgg
atgattcatctggacctgggcagcagcgagggcagggcgcgcgaggacctgctgctgctg
cgtgatctgactgcgcggctgctcgaggaccggccccggtaccgctgtcacaactgcggc
ttcgaggccaaggcgctgcactggcagtgcccgagctgcaaggaatggaaccgcatcaaa
ccgatctacggcgtggagggagaatga
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