Thiohalobacter sp. COW1: TspCOW1_04980
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Entry
TspCOW1_04980 CDS
T08363
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TspCOW1_04980 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thic01007
]
TspCOW1_04980 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thic03016
]
TspCOW1_04980 (pheT)
Enzymes [BR:
thic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
TspCOW1_04980 (pheT)
Amino acid related enzymes [BR:
thic01007
]
Aminoacyl-tRNA synthetase
Class II (U)
TspCOW1_04980 (pheT)
Transfer RNA biogenesis [BR:
thic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TspCOW1_04980 (pheT)
Prokaryotic type
TspCOW1_04980 (pheT)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
BCO30395
LinkDB
All DBs
Position
552079..554457
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AA seq
792 aa
AA seq
DB search
MKVSEQWLREWVDPPVGSKELAEQLTMAGLEVDSIEPAAGEFASVVVGEVLEVAPHPDAD
KLRVCRVEAGQGEALQIVCGAPNVHQGMRAPVALVGGRLPGGLKIKKAKLRGVESFGMLC
SARELGLSEEHAGLMALPADAPLGTDIRDYLKLDDRIIEVDLTPNRGDCLGMAGIAREVA
LLNDCELTPPAIAPITAQVEDSFPVAVDAPAACPRYLGRVIRGIDPAAVTPLWLQERLRR
GGIRPLGPVIDVTNYVLLELGQPMHGFDLARLQGGIRVRFAEAGEKLTLLDGREVALAAD
TLVIADARQPLALAGVMGGEGSGVSDSTRDVFLECAFFDPLHIAGRARAYGLQTDSSYRF
ERGVDPELQLRALDRATQLLVDICGGRPGPVIEVCSDAHLPRRPAIRLRSERIRRLLGFE
LKAAEVAGILEGLGCAVDAEREDWSVIPPSHRFDLAIEADLIEELGRVHGYNRLPSRVPA
GRLQMTPQREEQVPLNRLRLSLIERGYREAITYSFVDADLQRRLEPGRQPIPLANPISAD
LAVMRSSLWPGLLGALGHNLRRQQERVRLFESGLNFISEDNEIKQESYIAGVACGRPLPE
QWGVADGNLDFFDAKADLEALLRLGGRFEAFTFEAAQHPALHPGRSARVLCDGRSVGWIG
TLHPRHAEELELPADTQLFELEIAPVTTGRKAAFEPISRYPAIRRDLALLVDEAVPAAAV
AERIRLAAGETLKELRLFDVYQGKGIETGRKSIALGLILQDSSRTLTDQDVQAVVDEVTT
ALQRDLGASLRE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagcgagcagtggttgcgtgaatgggtggatccgccggtcggctcgaaagag
ttggccgagcagttgaccatggccgggctggaggtcgattccatcgagccggccgccggc
gagttcgcctcagtggtcgtcggcgaggtgctcgaggtcgcgccgcatccggatgccgac
aagctgcgggtgtgccgggtcgaggccgggcagggcgaggcgctgcagatcgtgtgcggt
gcgcccaatgtgcatcagggcatgcgcgccccggtggcgctggtcggcggcaggctgccc
ggcgggctgaagatcaagaaggccaaactgcgcggggtggagtccttcggcatgttgtgc
tcggcgcgcgaactgggcctgtccgaggagcatgccgggctgatggcgctgcctgccgac
gctccgctcgggaccgatattcgcgactatctcaagctcgacgaccgaatcatcgaggtc
gatctcacccccaaccgcggcgactgcctgggcatggccggcatcgcccgcgaggtggcg
ctgctcaatgactgcgaactgaccccgcctgccattgcgccgatcacggcgcaggtcgag
gacagcttcccggtggcagtggacgcaccggcggcctgcccgcgctacctgggccgggtg
atccgcggcatcgatccggcggcggtcacccccctgtggctgcaggagcggctgcgccgc
ggcggtatccggccgctggggccggtgattgacgtcaccaactatgtgctgctggagctg
gggcagcccatgcacggcttcgatctggcgcggctgcagggcggtatccgggtgcgcttc
gccgaagcgggggagaagctcaccctgctggacgggcgcgaggtggcgctggccgccgac
accctggtgatcgccgacgcccgccagccgctggccctggccggcgtgatgggcggggaa
ggctccggggtgagcgacagcacccgcgacgtgtttctggaatgcgccttcttcgatccc
ctgcatattgccgggcgggcgcgggcctacggcctgcagaccgattcttcctatcgtttc
gagcgcggtgtggatcccgaactccaactccgcgccctggatcgggccacgcagctgctg
gtcgatatctgcggtggccggcccggcccggtgatcgaggtctgcagtgatgctcacctg
ccgcggagaccggccatccggctgcgcagcgagcgtatccggcgcctgctcgggttcgag
ctgaaggccgccgaggtggccgggattctggaaggcctgggctgcgccgtggatgcggag
cgggaggactggtcggtcatcccgcccagccaccgtttcgacctggccatcgaggccgac
ctgatcgaggaactgggccgggttcacggctacaaccggctacccagccgggtgcctgcc
ggacggctgcagatgacgccgcagcgcgaggagcaggtgccgctcaaccggctgcgcctg
agcctgatcgagcgcggctaccgcgaggccatcacctacagctttgtcgacgctgacctg
cagcggcgcctggagcccggccgtcagcccatccccctggccaatccgatttcggccgat
ctggcggtgatgcgcagttcgctctggccggggctgctcggggcgctggggcacaacctg
cggcgccagcaggagcgggtgcgattattcgagtcaggtcttaactttatttcagaagat
aatgaaataaaacaggaatcatatattgcaggcgtcgcctgtggccggccattgccggaa
cagtggggcgtggctgacgggaacctggacttctttgacgccaaggccgatctggaggcg
ctgctgcgtctcggcggccgcttcgaggccttcactttcgaggccgcgcagcatccggcg
ctgcaccccggccgctcggcgcgtgtcctgtgcgacggtcgttcggtgggctggatcggc
accctgcatccacgacatgcagaagaactcgaacttcctgccgatacccagttgttcgaa
ctggaaattgccccagtgacgacaggccgcaaggcagccttcgagccgatttcccgttac
ccggccatccgccgcgacctggcgctgctggttgacgaggcggtgccggcggctgcggtg
gccgagcggatccgcctggcggcgggcgaaacgctaaaggaattgcgtctgtttgacgtt
taccagggcaagggtatagaaacgggtcgaaaaagcatcgctttaggcttgattctacag
gattcttcacgcacactaaccgatcaggacgtgcaggcggtcgtggacgaagtgacaacg
gccctgcaacgggatctcggagctagcttgagagagtag
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