Thiohalobacter sp. COW1: TspCOW1_05140
Help
Entry
TspCOW1_05140 CDS
T08363
Name
(GenBank) peptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TspCOW1_05140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thic02000
]
TspCOW1_05140
Transporters [BR:
thic02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TspCOW1_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BCO30411
UniProt:
A0A7R7JCL2
LinkDB
All DBs
Position
570419..571900
Genome browser
AA seq
493 aa
AA seq
DB search
MIRWRLLLLLTAVLLTSACQSPAEDVIRLGIAGRPANLDPLHATDAASARVNRLLYRALV
DFDAQQRPVPELARWERLTPTRYRFHLDPERAPFHDGAPLTAADVVATYRAVLDPATGSP
HRGLLSLIGQVSAVDADTVEFLLNRADRLFPGYLVIGIVPARLLAQGHDFQRAPIGSGPL
ELIERGGDGQLRLRRRSDGQQLAVQQVKDPTVRVLKLQRGELDIIQNDLPAELIRYLDGR
EDIRIERHRGANFSYIGFNLEDAQTGDPRLRRAVAHAIDRAAIIEHLLAGAARPAGALLP
PGHWAGHPELDGVDYDPDRARALLSELGYGPQRLLELSYKTSSDPLRLRIATVFQDQLAR
VGIRLRLQSYDWGTFYGDIKAGRFQLYSLMWVGIKTPDIFRHVFHSASLPPGGANRGRYR
DARIDAWIEAAEAAQTQTEQVTYYRRIQARLLETLPYVPLWYEDHVYAARADIRGYRLNL
HGNYDGLLEVQRR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctggcgcctcctgctgctgctgacagcggtcctgctgacgtcggcctgccag
tcgcctgctgaggacgtcatccggctcggcattgccgggcggcccgccaacctggatccg
ctgcacgccaccgacgcggcgtccgcgcgcgtcaaccggctgctgtaccgcgccctggtc
gatttcgacgcgcagcagcggccggtgccggaactggcgcgctgggagcgcctgacgccg
acccgttaccgctttcatctcgatcctgagcgcgcccccttccatgacggcgcgcccctg
accgccgccgacgtggtcgcgacctaccgggcggtgctggatccggccaccggatcaccg
caccgcggcctgctcagtctgatcgggcaggtcagcgccgtcgacgccgacacggtcgag
tttctgctgaatcgcgccgaccggctgttccccggttatctggtcatcggcatcgtgccg
gcccgcctgctggcgcaggggcatgactttcagcgtgcaccgatcggcagcggccccctg
gaactgatcgagcggggcggcgacggccagctgcggctgcgccggcgcagtgatggccag
cagcttgccgtccagcaggtgaaggacccgacggtgcgggtgctcaagctgcagcgcggt
gaactggacatcatccagaacgatctgccggccgaactgatccgctacctggacggccgc
gaggatatccggatcgaacgccatcgcggcgcaaatttcagttatatcgggttcaatctc
gaggatgcgcagaccggcgacccgcgcctgcgccgggccgtggcccacgccatcgaccgc
gccgccatcatcgagcatctgctggctggtgcggcgcggccggccggggcgctgctgccg
cccgggcactgggccgggcacccggaactggacggggtggactacgatccggatcgggcc
cgggccttgctgagcgaactcggctacggcccgcagcggctgctggagctcagttacaag
acctcgagcgatccgctgcggctgcgcatcgccaccgtgttccaggaccagctggcccgc
gtcggcatccggctcagactgcagagctacgactggggcaccttctacggcgacatcaag
gccgggcgctttcagctctacagcctgatgtgggtgggcatcaagaccccggacatcttc
cgtcacgtgttccacagcgcctcgctcccgcccggcggcgccaaccgcggccgctatcgg
gatgcgcggatcgatgcctggatcgaggcggccgaggcggcgcagacacagaccgagcag
gtcacgtattatcgacgcatccaggcgcggttgctggagaccctgccgtatgtcccgctg
tggtacgaggatcatgtctacgccgcgcgggcggatatccggggttaccgcctcaacctg
cacggcaattacgacgggctgctcgaggtgcagcgcagatga
DBGET
integrated database retrieval system
