Thiohalobacter sp. COW1: TspCOW1_05470
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Entry
TspCOW1_05470 CDS
T08363
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic00300
Lysine biosynthesis
thic01100
Metabolic pathways
thic01120
Microbial metabolism in diverse environments
thic01230
Biosynthesis of amino acids
Module
thic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TspCOW1_05470 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thic01002
]
TspCOW1_05470 (dapE)
Enzymes [BR:
thic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
TspCOW1_05470 (dapE)
Peptidases and inhibitors [BR:
thic01002
]
Metallo peptidases
Family M20
TspCOW1_05470 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BCO30444
UniProt:
A0A7R7JCJ4
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All DBs
Position
complement(603015..604145)
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AA seq
376 aa
AA seq
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MSTTTLDLARDLIARNSVTPDDAGCQAMMAEFLTARGFDITPLPFGEVSNLWARRGDSGP
LFVFAGHTDVVPTGPLEAWDSPPFEPTERDGWLYGRGAADMKGSLAAMLTAVDRFLATHP
EPRGSIAFLITSDEEGPSVNGTVKVVEWLQAQGTRIDWCLVGEPSSSEQVGDVMKNGRRG
SLSGELRIKGVQGHVAYPHLARNPVHQAAPALAELCATEWDAGNDHFPPTTFQISNVQAG
TGANNVIPGELMLLFNFRYSTESDADGLKRRVHELLDRHALEYELDWTHSGAPFLTPAGE
LVEAARAAVRERCGFEAQLSTAGGTSDGRFIAPTGAQVLELGPVNATIHKVNECVRCDDL
ERLSELYETILTKLLA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccaccctggacctggcccgcgacctgatcgcccgcaactcggtcaccccc
gatgacgccggctgccaggccatgatggccgaattcctgaccgcccgcggcttcgacatc
acccccctgcccttcggcgaggtcagcaacctgtgggcgcggcgcggtgacagcggaccg
ctgttcgtgttcgccggccacaccgacgtggtgccgaccggcccgctcgaggcctgggac
agcccgcccttcgaacccacggagcgcgacggctggctctacggccgcggcgccgccgac
atgaagggcagcctggccgccatgctcacggccgtggaccgctttctcgccacccatccc
gaaccgcgcggctccatcgccttcctcatcaccagcgacgaggaaggcccctcggtgaac
ggcacggtcaaggtggtcgagtggctgcaggcgcaggggacgcgcatcgactggtgcctg
gtgggcgaaccctccagcagcgagcaggtgggcgatgtgatgaagaacggccgccgcggc
tcgctgtcgggtgaactgcgcatcaagggcgtccagggccatgtcgcctatccgcacctg
gcccgcaacccggtccaccaggccgccccggccctggccgagctgtgcgcgaccgaatgg
gacgcgggcaacgaccactttccgcccaccaccttccagatctccaacgtccaggccggc
accggggcgaacaatgtcatccccggcgaactgatgctgttgttcaacttccgttattcc
accgagtccgacgccgacgggctcaagcgccgggtgcatgaactgctcgaccgccacgcg
ctggaatacgaactggactggacccattccggcgcccccttcctcaccccggccggcgaa
ctggtcgaggccgcgcgcgcggcggtacgcgagcgctgcggtttcgaagcgcagctgtcc
accgccggcggcacctcggacggtcgtttcatcgccccgaccggtgcccaggtcttggaa
ctgggaccggtgaatgcgaccatccacaaggtaaatgaatgtgtgcgctgcgacgatctc
gagcgcctgtcagaactatacgaaacgatcctgaccaaactgctcgcctga
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