Thiohalobacter sp. COW1: TspCOW1_06110
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Entry
TspCOW1_06110 CDS
T08363
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thic03016
]
TspCOW1_06110 (truD)
Enzymes [BR:
thic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TspCOW1_06110 (truD)
Transfer RNA biogenesis [BR:
thic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TspCOW1_06110 (truD)
Prokaryotic type
TspCOW1_06110 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BCO30508
UniProt:
A0A7R7GIZ4
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All DBs
Position
673454..674464
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AA seq
336 aa
AA seq
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MEYHPAFGPPLGRARLRLEPEDFVVIEQPLVEPDGEGEHAWLWVRKRGQNTDWVAGRLAR
LAGVKPREVSYAGLKDRHAVTEQWFSVQLPGRADPDWSALDAEGVTVLEARRHSRKLRRG
ALRGNRFRLRLRDFTGDAVALADRAGEITGRGLPNFFGAQRFGRDGGNLEAARRMFADPR
RRLPRHKRSLYLSAARSYLFNRILAERVRRGDWDRCLSGDVMQLDGRSALFAVPACDDEI
QSRLAAQEIHPTGALWGRGESLAGEECARLEAACLEPEAGLCEGLERAGMELDRRALRVR
VEGLQVTPEGNDLWLEFGLPAGSYATVLLEQLVEWA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcatcctgccttcggcccgccgctcggccgcgcccgcctgcgcctcgagccg
gaggatttcgtcgtcatcgagcagccgctggtggagccggacggcgagggcgagcatgcc
tggttgtgggtgcgcaagcgcggccagaacaccgactgggtggccggccggctggcgcgc
ctggccggggtgaagccacgcgaggtcagctacgccgggctgaaggaccgccacgccgtg
accgagcagtggttttcggtgcaactgccggggcgcgcggatcccgactggtccgcgctg
gatgccgagggcgtgaccgtgctcgaggcacggcggcactcgcgcaagctgcgccggggc
gcgctgcgcggcaaccgcttccgcctgcggctgcgcgacttcaccggcgatgccgtggcg
ctggccgaccgggccggggagatcaccggccgtgggctgcccaatttcttcggtgcccag
cgcttcggtcgcgacggcggcaacctcgaggcggcccggcgcatgttcgccgatccgcgc
cggcgcctgccgcgacacaaacgcagcctgtatctgtccgcggcgcgcagttacctgttc
aaccggatactggccgaacgggtgcgccgcggtgactgggatcgctgcctgtccggcgat
gtgatgcagctggacgggcgcagcgccctgttcgccgtcccggcgtgcgatgatgagatt
caatcccgcctggccgcgcaggagatccatcccaccggggcgttgtgggggcggggcgag
tcgctggctggcgaggaatgcgcgcggctggaggcggcctgcctggaaccggaagccgga
ctgtgcgagggactggaacgggcgggaatggaactcgatcgccgcgccctgcgggtgcgg
gtggagggtttgcaggtgacgccggagggcaatgatctgtggcttgagttcggcctgccc
gccggcagctatgccactgtgctgctggagcagctggtggagtgggcatga
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