Thiohalobacter sp. COW1: TspCOW1_07990
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Entry
TspCOW1_07990 CDS
T08363
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic00061
Fatty acid biosynthesis
thic00071
Fatty acid degradation
thic01100
Metabolic pathways
thic01212
Fatty acid metabolism
thic02024
Quorum sensing
thic04146
Peroxisome
Module
thic_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TspCOW1_07990
00071 Fatty acid degradation
TspCOW1_07990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TspCOW1_07990
09145 Cellular community - prokaryotes
02024 Quorum sensing
TspCOW1_07990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thic01004
]
TspCOW1_07990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thic04147
]
TspCOW1_07990
Enzymes [BR:
thic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TspCOW1_07990
Lipid biosynthesis proteins [BR:
thic01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TspCOW1_07990
Exosome [BR:
thic04147
]
Exosomal proteins
Exosomal proteins of breast milk
TspCOW1_07990
Exosomal proteins of breast cancer cells
TspCOW1_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
DUF2917
Motif
Other DBs
NCBI-ProteinID:
BCO30696
UniProt:
A0A7R7JCW0
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All DBs
Position
861519..863345
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AA seq
608 aa
AA seq
DB search
MTQMKERDVITPEEAGTLAGLFRERVRRSGDAEAYRYHDPDSGSWKSLSWNAMARRIARW
QAALRREGLEPGDRVALMLRNAPEWVQFDIAASGLGLVMVPLYTQDRAENIAYILQNAGV
KLLLIGDDEHWDLLKPVRGELGFLLRILSVRRCRDPGHEPRLRCLEDWLGPETDADPAEA
VQVAPLDPDTLATIVYTSGTTGRPKGVMLSHVNILWNAHASQRMAAVYPDDLFLSFLPLS
HTFERTVGYYLSMMCGAAVAYNRSIPELAEDLLAIRPTVLISVPRIFERVYNRIQAQLEE
KSPVARALFNSAVTVGWRRFEYRQGRTGWSPALLAWPLLDALVARKVMQKLGGRMRLAIS
GGAALPPRVSRLFVGLGLNLLQGYGLTETSPVLCASTLEDNVPDSAGLPLPDVEVRLGAG
DELLVRSPGVMLGYWDNPEATAAMIDDDGWLHTGDKVRMDARDRVWITGRCKEIIVLSNG
EKVPPGDMEMAISMDPLFDQVMVLGDGHPFLTALIVVNPDQAQLELKRLNVDPDTPGVLN
TEPFKSLAEARVREQIKTFPGYAQIHGITCYREAWTIESGLLTPTLKLRRDKVAAEAAGD
IDRMYAGH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgactcagatgaaagaacgcgatgtcatcacgccggaggaagccggtaccctggccggc
ctgttccgggagcgggtgcggcgttccggcgacgccgaggcctaccgctaccatgacccc
gacagcggcagctggaaaagcctgagctggaacgccatggcgcgacggattgcgcgctgg
caggcggccctgcgtcgcgagggcctggagcccggcgaccgcgtcgccctgatgctgcgc
aacgcccccgagtgggtgcagttcgatatcgccgcctcggggctggggctggtgatggtg
cccctctatacccaggaccgggccgagaacatcgcctatatcctgcagaacgccggggtg
aagctgctgctgatcggcgacgacgagcactgggatctgctcaagccggtgcgcggtgag
ctgggctttctgctgcgtatcctcagcgtgcggcgctgccgcgacccgggccatgaaccg
cggctgcggtgcctggaggactggctcggaccggaaaccgatgccgacccggccgaggcg
gtgcaggtcgcgccgctcgatcccgatacgcttgccaccatcgtctacacctcgggtacc
accggccggcccaagggcgtgatgctcagccatgtcaacatcctgtggaacgcccatgcc
tcgcagcgcatggcagcggtctaccccgacgatctgttcctgtccttcctgccgctgtcg
cataccttcgaacgcaccgtgggttattatttgagcatgatgtgcggcgcggcggtggcc
tacaaccgctccattcccgaactggccgaggacctgctggcgatccggcccacggtgctg
atctcggtgccgcgcatcttcgagcgcgtgtacaacaggatccaggcccagctggaggag
aagtcgccggtcgcgcgggcgctgttcaacagcgcggtcacggtgggctggcgccggttc
gaataccgccagggccggaccggctggtcccccgccctgctggcctggccgctgctcgat
gcgctggtggcgcgcaaggtgatgcagaaactgggcgggcgcatgcgccttgccatcagc
ggcggcgcggccctgccgccgcgggtctcacggctgttcgtcgggctggggctgaatctg
ctgcagggctacgggttgaccgagaccagcccggtgctgtgtgccagcaccctggaggac
aacgtgcccgacagcgccggcctgccgctgcccgatgtcgaggtgcggctgggtgcaggc
gacgaactgctggtgcgcagtcccggcgtgatgttgggctactgggacaacccggaggcg
accgcggccatgatcgatgacgacggctggctgcacaccggcgacaaggtgcgcatggac
gcgcgcgaccgggtctggattaccggccgctgcaaggagatcatcgtcctgtccaacggc
gagaaggtgccgcccggggacatggagatggccatctccatggatccgttgttcgatcag
gtcatggtcctgggcgatggccatcccttcctgacggcgctgatcgtggtcaacccggat
caggctcagctggaactcaaacgcctgaacgtggacccggatacgcccggcgtgctgaat
accgagccgttcaaatccctcgccgaggcccgcgtcagggaacagatcaagaccttcccc
ggttatgcccagatccatggcatcacctgctaccgggaggcctggaccatcgagtccggc
ctgctgacaccgacgctgaagctgcgccgcgacaaggtggcggcagaggcggccggggac
atcgaccgcatgtacgcaggacattga
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