Thiohalobacter sp. COW1: TspCOW1_10500
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Entry
TspCOW1_10500 CDS
T08363
Symbol
dppF
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TspCOW1_10500 (dppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thic02000
]
TspCOW1_10500 (dppF)
Transporters [BR:
thic02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TspCOW1_10500 (dppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
Mg_chelatase
AAA
AAA_29
AAA_5
TniB
AAA_25
NACHT
PRK
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BCO30947
UniProt:
A0A7R7GKY8
LinkDB
All DBs
Position
complement(1140754..1142760)
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AA seq
668 aa
AA seq
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MSDKLLTVRDLQVRFGAGEGAVRAVDGISLEIDRGETLALLGESGCGKSMTALALLRLLP
QPAGHIAGGQVLLEGQDLLALPEVGMRRIRGGRIAMIFQEPMTSLNPVMTVGRQIGEVLA
AHKGLQGRAATARAVELLDLVGIPDPARRVDEYPHQLSGGMKQRVMIAMALAGEPDLLIA
DEPTTALDVTIQAQVLELMRDIQRETGMAMLLITHDLGVVAGMADRVAVMYAGQIVEQAD
RRAFFEEPRHPYSRKLFAALPDMDKRDRPLTVIPGTVPPLNQRFHACRFAERCESAWQTC
RELEPAWLEDTGGRGVRCHLYDPNHPHPAAAAAVAASEKLGKRTAAPRELLDVSGLKVHF
PIHKGLFKRTVGHVYAVDDVDIRIPSGCTLALVGESGCGKTTVGKSILQLLRPTAGSVRF
DGDELTRLRGEALRRRRREFQIIFQDPFSSMNPRMQVGEIIEEGMVAQGLLPDTAARERR
VAELLDQVGLRPEHARRYPHEFSGGQRQRICVARALAVEPRLIICDEPTSALDVSVQAQI
LNLLKRLQLELDLAYLFITHNISVVAYLADRVAVMYLGRIVEEGPVDRVLTDPQHPYTQA
LLSAVPTLDAGGGREVIRLEGDIPSPSNPPAGCHFHPRCPQAMERCRRAYPERFERGSEH
WARCWLLE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaagctgctcacagtccgggatctgcaggtgcgcttcggcgcgggcgagggc
gcggtgcgcgccgtcgacgggatcagcctggagatcgatcgcggcgagaccctggcgctg
ctgggtgaatccggctgcggcaaatccatgaccgcgctggcgctgctgcggctgctgccg
cagccggccgggcacatcgccggcgggcaggtgctgctggaggggcaggatctgctggcg
ctgcccgaggtgggcatgcgccgcatccgcggcgggcgcatcgccatgatcttccaggag
cccatgacctcgctcaacccggtgatgacggtcggccgtcagatcggcgaggtgctggcc
gcgcacaagggtctgcagggacgggcggcgacggcccgggccgtcgagctgctggacctg
gtcgggatccccgatcccgcccgccgggtggacgaatacccgcatcagctctccggcggc
atgaagcagcgggtgatgatcgccatggcgctggccggcgagccggacctgctgatcgcc
gacgagccgaccacggcactggatgtcaccatccaggcccaggtgctggagctgatgcgc
gatatccagcgtgagaccggtatggccatgctgctgatcacccatgacctgggcgtggtc
gccgggatggccgaccgggtggcggtgatgtatgccggccagatcgtcgagcaggccgac
cgcagggccttcttcgaggaaccgcgccatccctacagccgcaagctgttcgccgccctg
ccggatatggacaagcgcgaccggccgctgaccgtgattcccggcaccgtgccgcccctg
aaccagcgtttccatgcctgccgctttgccgagcgttgtgaatccgcctggcagacctgc
cgcgagctcgagcccgcctggctggaggataccggcgggcggggagtgcgctgccatctg
tacgatccgaaccatccacatccggccgcggccgcagccgtcgccgcgtccgaaaagctg
ggcaagcgcacggccgcgccgcgcgagctccttgacgtgagcggactcaaggtgcatttc
cccatccacaaggggctgttcaagcgcacggtcgggcatgtctatgccgtggacgatgtc
gatatccgtatccccagcggctgcaccctggcgctggtgggcgagtcgggctgcggcaag
accacggtgggcaagtccattctgcagctgctgcgtcccaccgccggcagcgtgcggttc
gacggcgacgaactgacccggctgcgcggcgaggcgttgcgccgccggcgccgcgaattc
cagatcatcttccaggatcccttctcctccatgaacccacgcatgcaggtcggggagatc
atcgaggaaggcatggtggcgcagggcctgctgccggatacggctgcgcgcgagcggcga
gtggctgaactgctggatcaggtcgggctgcgccccgaacatgcccgacgctatccgcac
gagttctcgggtggccagcgtcagcgcatctgcgtggcgcgcgccctggcggtggaacct
cggctgatcatctgcgacgagcccaccagcgcgctggacgtctcggtccaggcgcagatc
ctgaatctgctcaagcgactgcagctggaacttgacctggcctacctgttcatcacccat
aacatctcagtggtggcctatctcgccgaccgcgtggccgtgatgtacctgggccgcatc
gtggaggaggggccggtcgaccgggtgctgaccgatccgcagcacccctacacccaggcg
ctgctctcggctgtaccgaccctcgatgccggcggcgggcgcgaggtgatccggctggaa
ggcgatattccctcgccctcgaatccgccggccggctgtcatttccacccccgctgtccg
caggccatggaacgctgccgccgggcctatcccgagcgcttcgagcggggatcggagcac
tgggcccgctgctggctgctggaatag
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