Thiohalobacter sp. COW1: TspCOW1_10840
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Entry
TspCOW1_10840 CDS
T08363
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thic03016
]
TspCOW1_10840 (truA)
Enzymes [BR:
thic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TspCOW1_10840 (truA)
Transfer RNA biogenesis [BR:
thic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TspCOW1_10840 (truA)
Prokaryotic type
TspCOW1_10840 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
BCO30981
LinkDB
All DBs
Position
complement(1183082..1183861)
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AA seq
259 aa
AA seq
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MRIALGIEYDGSAFNGWQRQSHAPSVQAALEQALSKVADHPVSVVCAGRTDTGVHATAQV
VHFDTHAGRSMRSWLLGGNSNLPPEVAITWVRPISEDFHARFKATARQYRYLILNRGHRP
ALLRKRVCWEHRPLDVEAMQAAARPLLGEHDFSAFRALACQARHPVRTLHRLELQRRGDL
ILLDIEANAFLHHMVRNIAGSLIAVGRGEQPVDWLAGLLAGRDRSRSGITAPAGGLYFVR
VAYPPEFGLPAEAVFPGIG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccctgggcatcgaatacgacggcagcgccttcaacggctggcagcgccag
agccacgcccccagcgtacaggccgcgctggaacaggccctgtcgaaggtggcggatcat
ccggtgagcgtggtctgtgccgggcgtaccgacaccggtgtgcatgccactgcccaggtc
gtgcacttcgatacccatgccgggcgcagtatgcgctcctggctgctgggcggtaattcc
aatctgccgccggaggtcgcgatcacctgggtgcggccgatcagcgaggatttccacgcc
cggttcaaggccacggcacgccagtaccgctacctcatcctcaaccgcggtcatcgcccg
gccctgctgcgcaagcgggtgtgctgggagcatcgtccattggatgtcgaggccatgcag
gccgccgcccgtccgctgctgggcgagcacgatttctccgccttccgggccctggcctgc
caggccagacacccggtgcgtaccctgcaccggctggagttgcagcgccggggcgacctg
atcctgctcgacatcgaggccaatgccttcctgcaccatatggtgcgcaacatcgccggc
agcctgattgcggtgggtcggggcgagcagccggtggactggctggccggactgctggcc
ggccgcgaccgctcgcgcagcggcatcacggcgccggccggtggattgtatttcgtgcgg
gtggcgtatccgccggaattcggcctgcccgccgaggcggtatttcccgggatcggttga
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