Thiohalobacter sp. COW1: TspCOW1_11430
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Entry
TspCOW1_11430 CDS
T08363
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic02020
Two-component system
thic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TspCOW1_11430 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TspCOW1_11430 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thic03021
]
TspCOW1_11430 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thic02035
]
TspCOW1_11430 (fliA)
Transcription machinery [BR:
thic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TspCOW1_11430 (fliA)
Bacterial motility proteins [BR:
thic02035
]
Flagellar system
Flagellar assembly proteins
Stator
TspCOW1_11430 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BCO31040
LinkDB
All DBs
Position
complement(1243183..1243911)
Genome browser
AA seq
242 aa
AA seq
DB search
MNGAAMYATTQERGQDELVTQHAPLVKRIAYHLMSRLPPSVQADDLIQAGMIGLLEAAKN
YDPSQGASFETYAGIRIRGAMLDEIRRTDWTPRSVHRKARQVAEAVREIENAMGRDARDH
EVAQALGIGLDEYHRILQDATGARMFSFEDPGALGDEQEVRGLEQPNEPLDNLQHEDFQG
ALADAIAGLPERERLVMSLYYDEELNLREIGEVLGVSESRVCQIHGQALIRLRARMGEWV
QS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagccgccatgtacgcaacaacacaggaacgtggacaggacgagctggtcacc
cagcatgcgcccctggtcaaacggatcgcctatcacctgatgagccggctgccgcccagc
gtgcaggccgacgacctgatccaggccggcatgatcggcctgctggaggcggccaagaac
tatgacccctcgcagggcgcgagcttcgagacctatgccggtatccgtatccgcggcgcc
atgctcgacgagatccgccgcaccgactggaccccgcgctcggtccatcgcaaggcgcgc
caggtggccgaggcggtgcgcgagatcgagaacgccatgggccgcgatgcccgcgatcac
gaggtggcccaggcgctgggcatcggtctggacgagtatcaccgcatcctgcaggacgcg
accggcgcgcgcatgttcagtttcgaggacccgggcgcgctcggcgacgagcaggaagtg
cgcgggctggagcagcccaacgagccgctggacaacctgcagcacgaggatttccagggc
gcgctggccgacgccatcgccggcctgccggagcgcgagcgcctggtgatgtcgctgtac
tacgacgaggaactgaacctgcgcgagatcggcgaggtgctgggggtgtccgagtcgcgc
gtgtgccagatccacggccaggccctgatccggctgcgcgcccgcatgggtgagtgggtt
cagagttga
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