KEGG   Thiohalobacter sp. COW1: TspCOW1_11570
Entry
TspCOW1_11570     CDS       T08363                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
thic  Thiohalobacter sp. COW1
Pathway
thic03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TspCOW1_11570 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thic03019]
    TspCOW1_11570 (rhlE)
Enzymes [BR:thic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TspCOW1_11570 (rhlE)
Messenger RNA biogenesis [BR:thic03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TspCOW1_11570 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase P-loop_SecA AAA_22 UTP25_NTPase-like Utp25_C
Other DBs
NCBI-ProteinID: BCO31054
UniProt: A0A7R7GKE5
LinkDB
Position
complement(1255415..1256728)
AA seq 437 aa
MSFETLGLMAELLRAIDSQGYTTPTPIQRQAVPVILEGRDVLAGAQTGTGKTAAFTLPML
QLLSQRPRKGRAPRALVLTPTRELAAQVGESVETYGAHLKLRSAIIFGGVGINPQIEALK
RGVDILVATPGRLLDHAGQGTVDLSAIEILVLDEADRMLDMGFIHDIRRVMKLLPQRRQN
LLFSATYSNEIKRLADGLLHRPALIEVARRNTAAETVTQHVYRVDKDGKRDLLIHLIDAG
QWSQVLVFTRTKHGANRLAEQLNRADIEAAAIHGNKSQSARTRALAGFKDGSVRVLVATD
IAARGLDIDRLPHVVNYELPNVPEDYVHRIGRTGRAGEEGAAISLVGADEAKLLKDIERV
LNKTIPVLPMPTFEPKVLKTAPRPEQRSRATPGNKSKVKKKPAISRNAASRSGDKPADGQ
RKRRRRNRPSQSPGAAR
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgtcatttgagacactcggcctcatggccgaactcctgcgtgccatcgattcgcagggc
tacaccaccccgacccccatccagcgccaggcggtgccggtgatattggaaggccgcgac
gtgctggccggcgcccagaccggcaccggcaagaccgccgcctttaccctgcccatgctg
cagctgctcagccagcgcccccgcaagggcagggcgccgcgcgccctggtgctcacaccc
acccgggagctggcggcgcaggtcggcgagagcgtggagacctacggcgcacacctgaag
ctgcgctccgccatcatcttcggcggggtggggatcaatccgcagatcgaggccctgaag
cgcggcgtcgacatcctggtcgccacgccgggccggctgctggatcatgccggccagggc
acggtggatctgtccgcgattgagatcctggtgctggacgaagccgaccgcatgctggac
atgggcttcatccacgacatccgccgggtgatgaagctgctgccccagaggcgtcagaac
ctgctgttctctgccacctactccaacgagatcaagcgtctggccgacggcctgctgcac
cggccggccctgatcgaggtggcgcgccgcaatacggccgccgagaccgtcacccagcat
gtgtaccgggtcgacaaggacggcaagcgcgatctgctgatccacctcatcgatgccggg
cagtggtcccaggtgctggtgttcacccgtaccaagcacggcgccaaccgtctggccgag
caactcaatcgggccgacatcgaagcggccgccatccatggcaacaagagccagagtgcc
cgcacccgggccctggccgggttcaaggatggcagcgtgcgggtgctggtggcgaccgac
atcgccgcccgcggcctggacatcgaccgcctgccgcatgtggtgaattacgaactgccc
aatgtgccggaagactatgtgcaccgtatcggccgtaccggtcgggccggtgaggagggc
gcggcgatttcactggtcggcgccgatgaagccaagctgctcaaggatatcgagcgggtg
ctgaacaagaccatcccggtgctgcccatgccgacgttcgagccgaaggtgctgaaaacg
gccccccgaccggagcagaggtccagggccacgcccggcaataagtcgaaggtgaagaag
aagccggccatcagccgtaacgccgcgtcccgatccggtgacaagccggcggacggccag
cgcaagcggcgccggcgcaatcgcccgtcccagtcccccggcgctgcccggtaa

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