Thiohalobacter sp. COW1: TspCOW1_12290
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Entry
TspCOW1_12290 CDS
T08363
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_12290 (phr)
Enzymes [BR:
thic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TspCOW1_12290 (phr)
DNA repair and recombination proteins [BR:
thic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TspCOW1_12290 (phr)
Prokaryotic type
TspCOW1_12290 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCO31126
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All DBs
Position
1329407..1330873
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AA seq
488 aa
AA seq
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MPASPSTDTAILWFRQDLRLADNPALRAACRDADRLIPVYILETDADPWALGAASRWWLH
HSLSALDAALRERGSRLHLMQGEAAACLQQLVEASGATAVYWNRRFEPAAIRRDRDIKTD
LKQRGISCHSFNAALLIEPWDHLNQQGRPYRVFTPFWRSLQPRLESLAPQRTPSQLPGLP
RRRGRSLQFEALGLLPQHDWDTGLHDTWQPDEAGAQNRLRTLLERRLADYPDARDRPDDE
GTSRLSPHLHFGELGPRQVLARVLQHTHTQRSAGLVGAGEQYLRQLAWREFAHHLLYHFP
ETPERPLDSRFEAFPWRDDPDSLRAWQRGRTGIPLVDAGMRELWHTGWMHNRVRMVVASF
LTKNLGIHWREGARWFWDTLVDADLANNTLGWQWTAGCGADAAPFFRIFNPVTQAQKFDP
DGSYLRRWLPELAALPDKWLARPWEAPAAVLAEAGVEPGATYPRPLVDLKASRERALGGW
DAIKGKSR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccggcatcaccctccactgacacggccatcctctggttccgccaggacctgcggctg
gccgacaatccggcgctgcgcgccgcctgccgcgatgccgaccggctgatcccggtctat
atcctggaaaccgatgccgatccctgggccctcggcgcggccagtcgctggtggctgcat
cacagcctgtccgccctggatgcggcactgcgtgaacgcggcagccggctgcacctgatg
cagggcgaagccgccgcctgcctgcagcagctggtcgaggccagcggtgcgaccgccgtc
tactggaaccgacgctttgagcccgcggccatcaggcgcgaccgcgacatcaagaccgat
ctgaagcagcgcggcatcagctgccacagcttcaatgccgccctgctgatcgagccctgg
gaccacctgaatcagcagggccgtccctatcgcgtgttcacccctttctggcgcagcctg
cagccgcggctcgagtcgctcgccccgcaacgcaccccatcacagctgcccggtctgccc
cggcgacgcgggcgttcgctgcagttcgaggcactcgggctgctgccgcaacacgactgg
gacaccggcctgcatgatacatggcagccggacgaggccggggcgcagaaccggctgcgg
accctgctggaacgacgcctggcggactacccggacgcgcgcgaccggcccgatgatgag
ggcacctcacgcctgtcgccgcatctgcattttggcgagttgggaccgcgccaggtgctg
gcccgtgtactccagcacacgcacacgcagcgcagcgccggcctggtcggcgccggggag
cagtacctgcgccagctggcctggcgcgagttcgcacaccacctgctctatcacttcccg
gagacccccgaacggccgctggacagtcgcttcgaggcctttccctggcgcgatgacccc
gattcgctgcgcgcctggcaacgcggccgcaccggcatcccgctggtcgacgccggcatg
cgcgaactgtggcacacggggtggatgcacaaccgggtgcgcatggtggtcgcctccttc
ctgaccaagaatctgggcattcactggcgggaaggcgcgcgctggttctgggataccctg
gtcgacgccgatctggctaacaacacattgggctggcagtggaccgccggctgcggcgcc
gacgccgcccccttcttccgcatcttcaatcctgtcacccaggcgcagaaattcgacccc
gacggcagctatctgcgccgttggctgccggaacttgccgcactgccggacaaatggctg
gcccggccctgggaggcgcctgcagcagtgctcgccgaagccggcgtggaacccggcgcg
acctatccccggccgctggtcgacctgaaggcctcgcgcgaacgcgccctcgggggctgg
gatgcaatcaagggaaagtcccgctga
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