Thiohalobacter sp. COW1: TspCOW1_14160
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Entry
TspCOW1_14160 CDS
T08363
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TspCOW1_14160 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_14160 (xseA)
Enzymes [BR:
thic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TspCOW1_14160 (xseA)
DNA repair and recombination proteins [BR:
thic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TspCOW1_14160 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Birna_RdRp_C
Motif
Other DBs
NCBI-ProteinID:
BCO31313
UniProt:
A0A7R7JDG2
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All DBs
Position
1527667..1529058
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AA seq
463 aa
AA seq
DB search
MQRPDLPPPSPALPGDERDVFTVSRLNAEARDLLESRFPLIWVEGELSNLARPGSGHWYF
SLKDARAQVGCAMFRGRNRNVRFQPQEGMQVLVRASVSLYEARGNYQLIVEHMEEAGAGA
LRRAFEQLRDKLDAEGLFAEAHKQPLPALPRRIGVITSPTGAAIRDILSVLGRRFPAIPV
LVYPVPVQGEGAGAKIAETIALADARRDCDVLILARGGGSLEDLWAFNEEGVARAIHACR
LPVVTGIGHEIDFTIADFVADRRAPTPSVAAEMVSPSQDDWRLRLRDREQKLTRRITQQL
ERRRERLAWLEQRLQRQHPGQRLTQWSQRLDELEGRLQRSQQVRLRHARSRLSELAARLH
RHNPVPRLEAARQRQTGLAHRLHLAMRHQLQRERERLTGLMRQLDTVSPLATLERGYAIV
RLGADGRILRSVEGLQTGDIIDVRLARGRLTTEVKTVHGDEDA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccctgaccttccacccccgtcccctgccctgcccggggacgaacgcgacgtc
ttcaccgtctcccggctcaacgccgaggcccgcgacctgctggagagccgtttcccgctg
atctgggtcgagggggagctgtccaacctggcccggcccggctccgggcactggtacttc
agcctcaaggatgcccgcgcccaggtcggctgtgccatgttccgcggccgcaaccgcaat
gtgcggttccagccgcaggaaggcatgcaggtgctggtccgcgccagcgtctccctgtac
gaggcccgcggcaactaccagctgatcgtcgagcacatggaggaggccggggccggcgcc
ctgcgccgggccttcgagcagctgcgcgacaagctggacgccgagggcctgttcgccgag
gcgcacaagcagccgctgcccgccctgccccggcgcatcggcgtgatcacctcccccacc
ggggcggccatccgcgatatcctcagcgtgctgggccggcgctttcccgccatcccggtg
ctggtctatccggtcccggtccagggcgagggggcgggcgcgaagatcgccgagacgatc
gccctggcggatgcccgccgggactgcgacgtcctgatcctggcccgcggcggcggctcg
ctggaggacctgtgggccttcaacgaggagggcgtcgcccgcgccatccatgcctgccgg
ctgccggtggtgacgggtattggccacgagatcgatttcaccatcgccgatttcgtcgcc
gaccggcgcgcccccaccccctcggtggcggccgaaatggtcagtcccagccaggacgac
tggcggctgcgcctgcgcgaccgggaacagaaactgacccggcggatcacgcaacaactc
gaacgccgccgcgaacgcctggcctggctggagcagcggctgcagcgccagcacccgggc
cagcggctgacccagtggagccagcgcctggacgaactggaaggccgcctgcagcgcagc
cagcaggtccggctgcgccacgcccgcagccggctgagtgaactggccgcccgcctgcat
cgccacaacccggtgccgaggctggaggcggcccgccagcgtcagaccggactggcccat
cgtctgcacctggccatgcgccatcaactgcagcgcgagcgcgagcgcctgaccggcctg
atgcgccagctcgacaccgtcagtccgctggccacgctggagcgcggctatgccatcgtg
cgcctgggggcggatggccgtatcctgagatcggtggaaggcctgcagaccggtgatatc
atcgacgtgcgactggcgcgcgggcggctgaccacagaggtcaaaaccgtccacggagat
gaagatgcatga
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