Thiohalobacter sp. COW1: TspCOW1_15250
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Entry
TspCOW1_15250 CDS
T08363
Symbol
metR
Name
(GenBank) transcriptional regulator
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thic03000
]
TspCOW1_15250 (metR)
Transcription factors [BR:
thic03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TspCOW1_15250 (metR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_30
HTH_5
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BCO31422
UniProt:
A0A7R7GLF7
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All DBs
Position
1665262..1666152
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AA seq
296 aa
AA seq
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MTIEIRHLRTLAALAASGSLAQAAERVHLTQSALSHQLRTLEDHYGVTLLHRGSRPIRLT
PAGERVLALAQEVLPALEQVEHSLLGIAAGRVGRLYVTIECHACFDWLLPLLEDFRQRWP
EVEIDIRTPDHFDALPALIDGDIDLVITSDPIERPRLEFQPLFDYRALLAMPTDHPLVER
DWIRPQDLADQALITYPVPQQRLDIFTHFLDPAGVTPAQVRQCELTAVLLQLVASRRGLA
ALPDWVLRPALEADRLAARPLGPQGMGGRMYAAVRTTEAELPWLADFIALATAAER
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgagatccggcacctccgcaccctcgccgccctcgcggccagcggcagcctg
gcgcaggcggcggagcgagtgcatctgacccagtcggcactgtctcaccagcttcgcacc
ctggaggatcactacggggtgacgctgctccatcgcggcagtcggccgatccgcctcact
ccggccggcgaacgtgtgctcgcgctcgcgcaggaagtcctgccggcgctggagcaggtc
gaacacagtctgctgggaatcgctgccggccgagtcggccgcctctatgtcaccatcgaa
tgccatgcctgcttcgactggctgctgccactgctggaggacttccgccagcgctggccg
gaagtcgagatcgacatccgcacgccggaccacttcgatgccctgcccgcactgatcgat
ggcgacatcgacctggtcatcacctccgaccccatcgagcggccgaggctggagttccag
ccgttgttcgactatcgcgccctcctggccatgccgaccgaccatccgctggttgaacgc
gactggatccgcccgcaggacctggccgaccaggcactcatcacctaccccgtcccgcag
cagcggctggatatcttcacccacttcctcgatccggccggtgtgacgccggcgcaggtc
cgccaatgcgaactgaccgccgtcctgttgcagctggtggccagccgccgcggcctggct
gcgctgcccgactgggtcctgcgcccggctctggaagccgatcgcctggcggcccggccg
ctgggcccgcaaggcatgggcgggcgcatgtacgcggccgtgcggaccaccgaggccgaa
ctaccctggctggcagacttcatcgccctggcgacggcggccgaaagatag
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