Thiohalobacter sp. COW1: TspCOW1_15690
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Entry
TspCOW1_15690 CDS
T08363
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TspCOW1_15690 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_15690 (ruvB)
Enzymes [BR:
thic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TspCOW1_15690 (ruvB)
DNA repair and recombination proteins [BR:
thic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TspCOW1_15690 (ruvB)
RecFOR pathway proteins
TspCOW1_15690 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_22
nSTAND3
AAA_16
TIP49
AAA_14
AAA_18
NTPase_1
ABC_tran
RNA_helicase
Rad17
AAA_17
AAA_28
AAA_33
AAA_24
NB-ARC
NACHT
TsaE
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
BCO31466
UniProt:
A0A7R7GKT1
LinkDB
All DBs
Position
complement(1707594..1708718)
Genome browser
AA seq
374 aa
AA seq
DB search
MLLPLVSGIPARYRAGNLNPAIMTDTDRIISPAVDSPEEARIDRAIRPHRLADYVGQPQV
REQMEIFIGAARGRGEALDHVLIFGPPGLGKTTLAHIIAAELDVNLRHTSGPVLEKPGDL
AALLTNLEPHDVLFVDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTL
VGATTRAGLLTSPLRDRFGIVQRLEFYSIADLTRIVQRSAGILGVDMDPAGAEEVARRSR
GTPRIANRLLRRVRDYAQVKAQGRVDAAVAQQAMELLNVDSHGFDIMDRKLLGALIEKFD
GGPVGIDSLAAAIGEERGTLEDVIEPYLIQQGFMMRTARGRIATRHAYLHFGITPPESLT
ARAEASLSLFDDPA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgttgctaccgcttgtcagcggtatccctgcgcgctatcgtgccggaaacctgaatccc
gccatcatgacagatactgaccgcatcatctcgcccgccgtggattcgcccgaggaggcg
cgtatcgaccgcgccatccgaccccaccgcctggccgactatgtcggccagccccaggtg
cgcgagcagatggagatcttcatcggcgcggcgcggggccggggcgaggcgctggaccat
gtgctgatcttcggcccgcccggcctgggcaagactaccctggcccacatcatcgccgcc
gaactggatgtgaacctgcgccacacctccggcccggtgctggaaaagccaggcgatctg
gctgccctgctgaccaacctggaaccgcatgacgtcctgttcgtggacgagatccaccgc
ctcagccccgtggtcgaggaggtgctgtacccggccatggaggactaccagctcgacatc
atgatcggcgaggggccggcggcgcgttccatcaagctggatctgccgccctttaccctg
gtcggtgcgaccacccgcgccgggcttttgacttcgccattgcgtgaccggttcggcatt
gtgcagcggcttgagttctatagcattgcggacctgacccgcatcgtgcagcgttcggcc
ggcatcctgggcgtggacatggacccggccggggccgaggaggtggcccggcgctcgcgc
ggcaccccgcgcattgccaaccggctgctgcggcgggtacgcgattacgcccaggtcaag
gcgcagggacgggtcgatgccgcggtggcgcagcaggcgatggaactgctcaacgtcgac
agccatggtttcgatatcatggaccgcaagctgctcggcgcgttgatcgagaagttcgac
ggcggccccgtcggcatcgacagcctggcggcggccatcggcgaggaacgcggcacgctg
gaggatgtgatcgagccctacctgatccagcagggcttcatgatgcgcaccgcgcggggc
cggatcgccacgcgccatgcctatctgcatttcggcatcaccccgccggaatccctgacc
gcccgggccgaggcctcgctgtcgctgttcgacgatccggcgtga
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