Thiohalobacter sp. COW1: TspCOW1_19830
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Entry
TspCOW1_19830 CDS
T08363
Symbol
rhlE-1
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
thic
Thiohalobacter sp. COW1
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCO31880
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Position
complement(2139669..2140967)
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AA seq
432 aa
AA seq
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MSFDSLNLNSELLRAIEACGFTEPSEIQRQAIPVALAGRDLMASAQTGTGKTAAFVLPVL
QRLATPARSRGHGPRVLVLTPTRELAGQVEANIRELGRFSRIVSGSVVGGVPYPPQMRLL
GKPLDLLVATPGRLMDHMERGRVDFSRLEVLILDEADRMLDMGFVDAVNQIAAATPASRQ
TLLFSATLEGRILEIARRLLKDPARIALAANTERHASIEQQAHQADDIGHKHKLLTHLLS
DQSLSQAVIFTATKRGADKLATKLQDQGHQSAALHGDMNQGKRKRTVDQMRRGKVRVLVA
TDVAARGLDIRGISHVINFDLPMVAEDYIHRIGRTGRGGATGTAISLIGPDDRRNLAGIE
RLLGERLPRIVVPGLEPQKPAPRGDDRRPAGKRKFKGGGRDHRAGKPGAGRSGNGGRPSI
RHKGRASTASPR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttgactccctgaacctgaattccgaactgctgcgtgccatcgaggcctgcggc
ttcaccgaaccttccgagatccagcgccaggccatccccgtggccctggccggccgcgac
ctgatggcctcggcccagaccggcaccggcaagacggccgccttcgtgctgccggtgctg
cagcgcctggccacgccggcccggagccgcggccacggcccgcgcgtgttggtgctgacc
ccgacccgcgaactggccggccaggtggaggccaacatccgtgagcttggccgtttcagc
cgcatcgtctccggcagcgtggtcggcggcgtgccctatccgccgcagatgcgcctgctg
ggcaaaccgctggatctgctggtcgccacgccgggccggctgatggaccacatggagcgc
ggccgggtggatttctcccgcctggaggtgctgatcctggacgaggccgaccgcatgctg
gacatgggctttgtggatgcggtcaaccagatcgccgcggccaccccggccagccgccag
accctgctgttctccgccaccctggaaggccgcatcctggagattgcccggaggctgctc
aaggacccggcgcgcatcgccctggcggccaacaccgagcgtcacgcctcgatcgagcag
caggcgcaccaggccgatgacatcggccacaagcacaagctgctcactcacctgctcagt
gaccagtcgctgtcgcaggcggtgatcttcaccgccaccaagcgcggtgcggacaagctg
gcgaccaaactccaggaccagggtcatcagagcgcggccctgcacggcgacatgaaccag
ggcaagcgcaagcgcaccgtggatcagatgcgccgcggcaaggtgcgggtactggtggcc
accgacgtggccgcccgcggcctggacatccggggtatcagccacgtgatcaacttcgac
ctgcccatggtggccgaggactatatccaccgcatcggccgcaccggccgcggcggggcc
accggcacggccatttcgctgatcggtcccgacgaccggcgcaacctggccggcatcgag
cgtctgctgggcgagcggctgccgcgcatcgtggtgcccggcctggaaccgcagaaaccg
gcgccgcgtggcgatgatcgccgcccggcgggcaagcgcaagttcaagggcggcggccgc
gatcatcgggccggcaaacccggtgccgggcgcagcgggaatggcgggcggccgagcatc
cggcacaagggccgtgccagcactgccagtccgcgttga
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