Thiohalobacter sp. COW1: TspCOW1_22380
Help
Entry
TspCOW1_22380 CDS
T08363
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thic03000
]
TspCOW1_22380
Transcription factors [BR:
thic03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TspCOW1_22380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_5
SBP_bac_11
MarR_2
PBP_like
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BCO32135
UniProt:
A0A7R7JCT7
LinkDB
All DBs
Position
complement(2406019..2406960)
Genome browser
AA seq
313 aa
AA seq
DB search
MNVTLRQLRIFEAVARHLSFTRASEELHLTQPAVSMQIKQLEQAVGLPLLDQQGKKTYLT
EAGEEMYRYACAVTDKLEEAAQVFEELKGMRRGHMSIAVASTANYFAPRLLATFFQRYPD
VTVSLDVTNREGLLRALAENETDLVIMGKPPEDMDLVAENFMDNPLVVIAPTNHPLTRKR
SRIPFAALASETFLIRERGSGTRSAMERHFAQHGLELSSTMEMGTSEAIKQGVEAGLGLG
LLSLHTLEMELALKRVAILDVETFPIMRHWYVVHRRGKRLSTAAQAFKHFLLKEARNLLS
LPEVSRPRHKDAG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcactctgcgtcagctgcgcatcttcgaggccgtggcccgtcacctgagcttc
acccgcgcttcggaggagttgcatctgacccagccggccgtgtccatgcagatcaagcag
ctggaacaggccgtgggcctgccgctgctggatcagcagggcaagaagacctacctcacc
gaggccggcgaggagatgtaccgctatgcctgcgccgtgaccgacaagctcgaggaagcc
gcccaggtgttcgaggagctcaagggcatgcggcgcggccatatgagcattgccgtggcc
agtaccgccaactacttcgccccgcggctgctggccaccttcttccagcgttacccggac
gtgactgtcagtctggacgtgaccaaccgcgagggtctgctccgggccctggccgagaac
gagaccgacctggtgatcatgggcaagcccccggaggacatggacctggtggcggagaat
ttcatggacaaccccctggtggtcatcgccccgaccaatcacccgctgacgcgcaagcgc
agccggattcccttcgcggcgctggccagcgaaacctttctcatccgcgaacgcggatcg
ggcacccgctcggccatggaacggcacttcgcccagcacggactggaactcagcagcact
atggaaatgggtaccagcgaggccatcaagcagggtgtcgaggccggcctggggctgggg
ctgctgtcgctgcacaccctggagatggaactggcgctcaagcgagtggcgatcctggat
gtggagacctttcccatcatgcgtcactggtatgtggtgcaccgacgcggcaagcgcctg
tccaccgcggcccaggccttcaagcacttcctgctcaaggaggccaggaacctgctcagt
ctgcccgaggtgagccgtccgcggcacaaggacgcgggctga
DBGET
integrated database retrieval system
