Thiohalobacter sp. COW1: TspCOW1_23750
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Entry
TspCOW1_23750 CDS
T08363
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic03030
DNA replication
thic03410
Base excision repair
thic03420
Nucleotide excision repair
thic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TspCOW1_23750 (polA)
03410 Base excision repair
TspCOW1_23750 (polA)
03420 Nucleotide excision repair
TspCOW1_23750 (polA)
03440 Homologous recombination
TspCOW1_23750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thic03032
]
TspCOW1_23750 (polA)
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_23750 (polA)
Enzymes [BR:
thic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TspCOW1_23750 (polA)
DNA replication proteins [BR:
thic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TspCOW1_23750 (polA)
DNA repair and recombination proteins [BR:
thic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TspCOW1_23750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TspCOW1_23750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
FCD
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCO32272
UniProt:
A0A7R7GMC2
LinkDB
All DBs
Position
complement(2541883..2544591)
Genome browser
AA seq
902 aa
AA seq
DB search
MPSTKPVVLVDGSSYLYRAFHALPPLTNSRGEPTGAVYGVVNMLKRLLKDYQPEHVAVVF
DARGKTFRDEMFEHYKANRPPMPEELAAQIEPLHALVRALGFPVLQVPGVEADDVIGTLA
RQADARGEPVLISTGDKDMAQLVEGGITLVNTMSNTTLDRAGVVEKFGVPPERIVDYLAL
VGDSSDNIPGVPKVGPKTAAKWLNEYGSLDALIEQAESVKGKVGESLRENLAQLDLSRQL
ATIRCDLELKQDVDALAMQPPDRAALKALYEQMEFRTWLKEILGSDEPAQASAATAPPAA
EVDYETVLTQTQLDAWLKELEQADHFAFDTETTSLEYMQAEIVGLSFAVETHRAAYVPLA
HDYAGAPEQLDRDRVLKQFKKLLEDKAPKKIGHNLKYDMSVLANHGIELRGIAFDTMLES
YVLDSTASRHDMDSLALKYLAHKCTGYEEVAGKGAKQLSFNEVPVETAAPYAAEDADITL
RLHQTLWPRLQQERALVSVFSDIDLPLVPVLSRMERNGVKVDRDMLATQSGELAHKMAEI
EEAAFEEAGQPFNIGSPKQIQEILFDQQGLPVLAKTPKGAPSTAESVLAELALDYRLPRL
ILDYRSLSKLKSTYTDKLPERIDARTGRVHTSYHQAVAATGRLSSTEPNLQNIPVRTESG
RRIRQAFIAEQGYRILAADYSQIELRIMAHLSGDEGLLAAFAAGEDIHRATAAEVFGAQP
DQVTSEQRRSAKAINFGLIYGMSAFGLAKQLGIERGAAQEYVDLYFTRYPGVKAYMDRTR
EQAHDQGYVETLFGRRLYLPEINARNHQRRTAAERTAINAPMQGTAADIIKLAMISTDAW
IRSGGLDLRMVMQVHDELVFEVAAGDVEAAQAAIRERMQTAAELAIPLEVEVGVGANWDE
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtaccaagccggtcgtcctggtggacggctcctcctatctctaccgggccttc
cacgccctgccgccgctgaccaattcccgcggcgagcccaccggggcggtctatggtgtg
gtcaacatgctcaagcgcctgctcaaagactatcagcccgagcacgtggcggtggtgttc
gatgccagaggcaaaaccttccgcgatgagatgttcgagcactacaaggccaaccgcccg
cccatgccggaggaactggccgcccagatcgagccgctgcacgccctcgtccgggcgctg
ggctttccggtgctgcaggtcccgggcgtggaggcggacgatgtcatcggcaccctggcc
cggcaggccgacgcccgcggcgagccggtgctgatctccaccggcgacaaggacatggcc
caactcgtcgaaggcggcatcaccctggtcaacaccatgagcaacaccaccctggaccgc
gccggcgtggttgagaagttcggcgtgccgccggagcgcatcgtcgactacctggccctg
gtcggcgacagttcggacaacatccccggggtgccgaaggtcggccccaagaccgcggcc
aagtggttgaacgagtacggctcgttggatgcgctgatcgagcaggccgaatcggtcaag
ggcaaggtcggcgagagcctgcgtgagaacctggcgcagctggatctgtcgcgtcagctc
gccaccatccgctgtgacctggagctgaagcaggacgtcgacgccctggccatgcagccg
ccggaccgcgcggcgctcaaggcactctacgagcagatggagttccgcacctggctgaag
gagatcctgggcagcgatgaaccggcgcaagcctcggcggcgaccgcgccgcccgccgcc
gaggtcgactacgagaccgtgctgacgcagacgcagctcgatgcctggctgaaggaactg
gagcaggccgaccatttcgccttcgataccgagaccaccagcctggaatacatgcaggcc
gaaatcgtcggcctgtccttcgccgtggagacgcaccgggccgcctatgtgcctctggcc
cacgactatgccggcgcgccggaacagctcgaccgcgaccgggtgctcaagcagttcaag
aaattgttggaggacaaggcaccgaagaagatcggtcacaacctcaagtacgacatgagc
gtgctggccaatcacggcatcgagctcaggggcatcgccttcgacaccatgctggaatcc
tatgtcctggactcgaccgccagtcgccatgacatggactccctggcgctgaaatacctg
gcgcataaatgcaccggctacgaggaggtcgccggcaagggggcgaagcagctcagcttc
aacgaggtcccggtcgagaccgccgcgccctatgccgccgaggatgccgacatcaccctg
cgcctgcatcagaccctgtggccgcggctgcagcaggagagggcgctggtgagcgtgttc
agtgatatcgatctgccgctggtaccggtgctgtcgcggatggaacgcaatggcgtgaag
gtcgaccgcgacatgctggcgacccagagcggggaactggcgcacaagatggccgaaatc
gaggaggccgcgttcgaggaagccggccagcccttcaacatcggctcgcccaagcagatt
caggagatcctgttcgatcagcagggtctgccggtcctggccaagacgcccaagggcgca
ccctccaccgcggaaagcgtgctggccgagctggcgctggactatcgcctgccgcggctg
atcctggactaccgcagcctgagcaagctcaagtccacctacaccgacaagctgcccgaa
cgcatcgatgcccgcaccgggcgggtgcacacctcctatcatcaggcggtggccgccact
ggccggttgtcctccaccgagcccaatctgcagaacatcccggtgcgcaccgagtccggc
cggcgcatccgccaggccttcattgccgagcagggctatcgcatcctggccgcggactac
tcccagatcgagctgcgcatcatggcgcatctgtccggcgacgaggggctgctcgcggcc
ttcgccgccggcgaggacatccaccgcgccaccgcggccgaggtgttcggcgcgcagccg
gaccaggtcacgagcgagcagcgccgcagcgccaaggcgatcaacttcggcctgatctac
ggcatgtcggccttcggcctggcgaaacagctgggcatcgagcgtggcgcggcgcaggaa
tacgtggatctgtacttcacccgctatccgggtgtgaaggcgtacatggaccgcacccgc
gagcaggcccatgaccagggttatgtggagaccctgttcggccggcgcctgtacctgccc
gagatcaacgcccgcaaccaccagcgccgcaccgcggccgaacgcaccgccatcaatgcc
cccatgcaggggacggccgccgacatcatcaagctggccatgatcagcaccgacgcctgg
atccgcagcggcgggctggacctgcgcatggtgatgcaggtccacgacgagctggtgttc
gaggtggcggcaggcgatgtcgaggcggcgcaggcggccatccgcgagcgcatgcagacc
gcggccgagctggccattccgctggaggtcgaggtgggggtcggtgccaactgggacgag
gcccactga
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