Thiohalobacter sp. COW1: TspCOW1_27370
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Entry
TspCOW1_27370 CDS
T08363
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thic03021
]
TspCOW1_27370 (rpoH)
Transcription machinery [BR:
thic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TspCOW1_27370 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BCO32634
UniProt:
A0A7R7JER4
LinkDB
All DBs
Position
complement(2909363..2910232)
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AA seq
289 aa
AA seq
DB search
MTHAMVAVQPEHQLTLARGDLTGYIQQVNSFPMLSADEERQLATRLREDGDLEAARQLVL
SHLRFVVHVARTYSGYGLPLGDLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWVRAEIHE
FILRNWRIVKVATTKAQRKLFFNLRSAKKRLGWFTENEVRAVAEDLGVKPEVVREMESRM
SGQDVGFDMSSEDSDEDSRSFSPAAYLSAPNTDPAELLESDDWEDHNQQALYQALAGLDE
RSRDILAQRWLADNKATLHELADRYGVSAERIRQLEANAIKKLKTAIAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgcgatggttgcagtacagccggaacaccagctcacgctcgcccggggcgac
ctgaccggctacatccagcaggtcaacagcttcccgatgctcagcgccgacgaggagcgg
cagctggccacgcgcctgcgcgaggacggcgacctggaggccgcccgccagctggtgctg
tcacacctgcgcttcgtggtgcatgtggcccgcacctacagcggctacggcctgcccctg
ggtgacctgatccaggagggcaacatcggcctgatgaaggcggtcaagcgtttcgatccc
acggtcggcgtgcgcctggtctccttcgccgtgcactgggtccgggccgagatccacgaa
ttcatcctgcgcaactggcgcatcgtcaaggtggccaccaccaaggcccagcgcaagctg
ttcttcaacctgcgctcggccaagaagcgcctgggctggttcaccgagaacgaggtccgg
gccgtggccgaggacctgggcgtgaaacccgaggtggtgcgcgagatggaatcgcgtatg
tccggccaggacgtgggcttcgacatgagcagtgaggacagcgacgaggacagccgcagc
ttctcaccggccgcctacctgagcgccccgaacaccgacccggccgagttgctggaatcc
gacgactgggaggaccacaaccagcaggccctgtaccaggccctggccgggctggacgag
cgcagccgcgatatcctggctcagcgctggctggccgacaacaaggccacgctgcacgaa
ctggccgaccgctacggcgtgtccgccgagcgcatccgacagctggaggccaatgccatc
aagaagctcaagaccgccattgccgcctga
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