Thiohalobacter sp. COW1: TspCOW1_29400
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Entry
TspCOW1_29400 CDS
T08363
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
thic
Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thic01011
]
TspCOW1_29400
Enzymes [BR:
thic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TspCOW1_29400
Peptidoglycan biosynthesis and degradation proteins [BR:
thic01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TspCOW1_29400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
BCO32837
UniProt:
A0A7R7GPL7
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Position
complement(3121957..3122778)
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AA seq
273 aa
AA seq
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MSVTRPLLYGLIALLLSACGGGAYVDRDGAPGRDVDVAAIPDAVPRHEPRSRYGNPGSYE
VFGKRYYVMDSSHGYAERGIASWYGTKFHGRRTSSGEPYDMYAMTAAHKSLPLPTYARVT
NLRNGRSIVVKINDRGPFHEGRIIDLSYVAAKKLDIVATGTAPVEVVALNPGQSEPQLRS
ASAAPRPAVQPARNDNPDLYLQVGAFSSRHNAERLSHQLQDIDLPGIEIQQGYSDQRPVF
RVRIGPLASIEDADRMAESLTRFGIQRPHVVVD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcacacgccctcttctctatggcctgatcgccctgttgctgagcgcctgcggc
ggcggggcctatgtcgaccgcgacggcgcgcccggccgcgatgtggatgtggccgccatc
cccgacgccgtcccgcgacatgagccccgcagccgctacggcaaccccggttcctacgag
gtcttcggcaagcgctattacgtcatggactcgagccatggctatgccgagcgcggcatc
gcctcctggtacggcaccaagttccacggccgacgcacctccagcggcgagccctacgac
atgtacgccatgaccgccgcccacaagagcctgccgctgcccacctacgcccgcgtgacc
aacctgcgcaacggccgctccatcgtggtcaagatcaacgatcgcggccccttccacgag
ggccgcatcatcgacctgtcctatgtggcagcgaagaaactcgatatcgtcgccaccggt
acggccccggtcgaggtcgtggccctgaatccgggccagtccgaacctcagctgcgcagc
gccagcgccgccccccggccggcagtgcagccggcccgcaatgacaaccccgatctgtac
ctgcaggtgggcgccttcagttcccgccacaatgccgaacggctgagccaccagctgcag
gacatcgacctgcccgggatcgagatccagcagggctacagcgaccagcgcccggtgttc
cgcgtgcgcatcggcccgctcgccagcatcgaggatgccgaccgcatggccgaatccctg
acccgtttcggcatccagcgcccccacgtcgtggtagactag
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