Thiohalobacter sp. COW1: TspCOW1_31350
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Entry
TspCOW1_31350 CDS
T08363
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TspCOW1_31350 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_31350 (uvrA)
DNA repair and recombination proteins [BR:
thic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TspCOW1_31350 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TspCOW1_31350 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
BCA_ABC_TP_C
cobW
Viral_helicase1
ExoX-like_C
ScfRs
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
BCO33032
UniProt:
A0A7R7GPZ2
LinkDB
All DBs
Position
complement(3329277..3332120)
Genome browser
AA seq
947 aa
AA seq
DB search
MDTIRIRGARTHNLANIDLELPRDRLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLSMMEKPDIDHIEGLSPAISIEQKTTSHNPRSTVGTITEIYDYLRLLYARVGVPEC
PEHRIALDAQTVSQMVDQVMALPEGTRLMLLAPVVQARKGEHVHVLEGLRAQGFIRARID
GEIVELDQLPTLDLKRQHTIEAVVDRLKVRADIQIRLAESFETALRLSDGQVRVAFMDDP
QREPLLFSARFACPLCGYSITELEPRLFSFNNPAGACPACDGLGVKQFFDPERIVAHPHL
SLAGGAVRGWDRRNAYYFQLISSLADHYGFDIDTPFEELPEATRAVILHGSGDEEIDFEY
LSERKGFTVRRHTFEGIIPNMDRRYRETESNIVREELARYLSTRACPECGGTRLNRAARH
VFIEGRTLPELTALPVGRALEFFGTLTLEGRRGRIAVKILKEINQRLSFLVNVGLDYLSL
ERSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNQRLLNTLDYLRDLGNT
VIVVEHDEEAIMSADHVLDMGPGAGIHGGHIVAQGTPADIMANPDSLTGQYLSGTRRIAV
PKQRTPVNELRMLRVLGATGNNLKGVDIDIPVGLMTCITGVSGSGKSTLINDTLYPFAAR
ELNKAATSPAPHRAIEGLEHFDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RSRGYKSGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEIRYK
GRTIHEVLELTVEDALSFFSAVPALKRKLQTLMDVGLSYIRLGQNATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFYDIEQLLAVLHRLRDHGNTVIVIEHNLDVIKTADWV
IDLGPEGGDKGGELIVEGTPETVAAHADSHTGRFLRPLLEAGSSERA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggacaccattcggatacgcggcgcccgcacccacaacctggccaacatcgacctggag
ttgccccgcgaccgcctgatcgtcatcaccggcctgtccggctcgggcaagtcctcactg
gccttcgacaccatctacgccgagggccagcgccgctatgtggaatcgctgtcggcctac
gcccgccagttcctgtcgatgatggaaaagcccgacatcgaccacatcgagggactgtcg
ccggccatctccatcgagcagaagaccacctcgcacaatccgcgctccaccgtgggcacc
atcaccgagatctacgactacctgcggctgctgtacgcacgcgtgggcgtgcccgagtgc
cccgagcaccgcatcgcactggatgcccagaccgtgagccagatggtggaccaggtcatg
gccctgcccgagggcacccggctgatgctgctcgcgccggtggtgcaggcgcgcaagggc
gagcatgtccacgtactggaagggctgcgtgcccagggtttcatccgcgcccgcatcgac
ggtgaaatcgtcgaactggaccagctcccgacgctcgacctcaagcgccagcacaccatc
gaagccgtggtcgaccggctcaaggtgcgcgcggacatccagatacgcctggccgaatcc
ttcgaaaccgcgctgcggctgtccgacggccaggtgcgggtcgccttcatggacgacccg
cagcgcgaaccgctgctgttctcggcccgcttcgcctgtccgctgtgcggctactccatc
accgagctggaaccgcggctgttctccttcaacaacccggccggcgcctgcccggcctgc
gacggcctgggtgtgaagcagttcttcgatcccgaacgcatcgtggcccatccgcatctg
agtctggccggcggcgcggtgcgcggctgggaccggcgcaatgcctattacttccagctc
atcagttcgctggccgatcactacggcttcgacatcgacaccccgttcgaggaactgccg
gaggcgacgcgcgcggtgatccttcacggctcgggggatgaagagatcgacttcgagtac
ctgtccgagcgcaagggcttcaccgtccgccggcacaccttcgagggcatcatccccaac
atggaccggcgctaccgcgagaccgaatccaacatcgtgcgcgaggaactggcccggtat
ctgagcacccgcgcctgccccgagtgcggcggcactcgcctgaaccgcgcggcccggcac
gtgttcatcgaaggccgcaccctgcccgaactgaccgcgcttccggtcggacgggcgctg
gaattcttcggcacgctcacgcttgaaggtcgtcgcggcaggatcgcggtcaagatcctc
aaggagatcaaccaacgcctgagtttcctggtcaatgtcggcctggactacctgtcgctg
gaacgcagcgccgacaccctctccggcggcgaagcccagcgcatccgcctggccagtcag
atcggcgccggcctggtgggggtgatgtacatcctggatgaaccctccatcggcctgcac
cagcgcgacaaccagcggctgctcaacacgctcgactacctgcgtgatctgggcaatacc
gtcatcgtggtcgagcacgacgaggaggccatcatgagcgccgatcatgtgctcgacatg
ggcccgggcgccggcatccacggcggccatatcgtcgcccagggcacaccggccgatatc
atggccaaccccgactcgctcaccggtcagtatctctcgggcacgcgtcggatcgcagtc
cccaagcagcgcaccccggtgaacgaactgcgcatgctgcgggtgctgggtgcgaccggc
aacaacctcaagggcgtggacatcgacatcccggtggggctgatgacctgcatcaccggc
gtgtccggctccggcaagtcgacgctcatcaacgataccctctatcccttcgccgcgcgc
gagctgaacaaggccgccaccagtccggcaccgcaccgcgccatcgagggcctggagcac
ttcgacaaggtggtcgacatcgaccagagtccgatcggccgcacgccccgctccaacccg
gccacctacaccggcctgttcacgcccatccgcgaactgttcgccggcacccaggaggca
cgctcgcgcggctacaagagcggccgcttcagcttcaacgtcaagggcgggcgctgcgag
gcctgccagggcgacggcgtgatcaaggtggaaatgcacttcctgcccgacatttatgtg
ccctgcgacgtctgtcacggcaagcgctacaaccgcgagaccctggagatccgctacaag
ggcaggaccatccacgaggtactggagttgacggtggaggatgccctgtccttcttcagc
gcggtaccggcgctcaagcgcaagctgcagaccctgatggatgtcggactgtcgtacatc
aggctgggccagaacgccaccaccctgtccggcggcgaggcgcagcgggtgaagctggcg
cgggagctgtccaagcgggataccggcaagaccctctacatcctggacgagcccaccacc
ggcctgcacttctatgacatcgagcagctgctggccgtgctgcaccggctgcgcgaccac
ggcaataccgtgatcgtgatcgagcacaatctggacgtgatcaagaccgccgactgggtc
atcgacctggggccggagggcggcgacaagggcggcgaactgatcgtggagggtacaccg
gagacggtggcggcccatgcggattcacatacggggcggttcctgcggccgctgctggag
gcggggtcttctgaacgtgcgtga
DBGET
integrated database retrieval system
