Thiohalobacter sp. COW1: TspCOW1_31770
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Entry
TspCOW1_31770 CDS
T08363
Symbol
pilR
Name
(GenBank) type 4 fimbriae expression regulatory protein PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TspCOW1_31770 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thic02022
]
TspCOW1_31770 (pilR)
02035 Bacterial motility proteins [BR:
thic02035
]
TspCOW1_31770 (pilR)
Two-component system [BR:
thic02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
TspCOW1_31770 (pilR)
Bacterial motility proteins [BR:
thic02035
]
Pilus system
Twitching motility proteins
TspCOW1_31770 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
AAA_16
HTH_28
AAA
AAA_22
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BCO33074
LinkDB
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Position
complement(3374562..3375911)
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AA seq
449 aa
AA seq
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MPRYRALVVDDEPDILELIEITLGRMGIDTTAAADLAAARAQLGNGERFDLCLTDMRLPD
GSGLDLVAEIQAGRPDLPVAVITAYGNMDTAVQALKAGAFDFVSKPVDLQVLRNLVGTAL
KLSDTRSFPARDRRSRDELIGDSAPMQRIRALIAKLARSQAPVYISGESGTGKELVARLI
HDKGPRAEQPFIAVNCGAIPAELMESEFFGHKKGSFTGAAGDKEGLFQAASGGTLFLDEV
AELPLHMQVKLLRAIQEKAVRPVGEQREAPVDVRVLTATHKNLEQLVRDGHFRQDLYFRI
NVIELKVPPLRERREDIPRLVEHLLNKLGHDARHRLSDTAVQALQAYDFAGNVRELENIL
ERAVTMAEGEVIEVEDLHLQTNTASEQPTTAGNPPPPGSVPLEDYLGEIEKQAILDALEQ
THQNKTAAAELLGLSFRALRYRLKKLGLD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctaccgcgcactcgttgtcgatgacgaacccgacatcctcgagctgatcgag
atcacgctcgggcgcatgggcatcgacaccaccgccgccgccgatctggccgcggcgcgc
gcgcaactcggcaacggtgaacgcttcgacctgtgcctgaccgacatgcgcctgcccgac
ggctcaggcctggacctggtcgccgagatccaggccggccgccccgacctgccggtggcc
gtgatcaccgcctacggcaacatggacaccgctgtgcaggcgctcaaggccggtgccttc
gacttcgtctccaagccggtggacctgcaggtgctgcgcaacctggtgggcaccgcactg
aaactctccgatacccgcagctttcccgcgcgcgaccgtcgctcccgcgacgaactgatc
ggcgactctgcccccatgcagcgcatccgcgccctgatcgccaagctggcccgcagccag
gcgccggtctacatcagcggcgaatccggcaccggcaaagaactggtcgcccggctgatc
cacgacaagggcccgcgcgccgaacagcccttcatcgccgtgaactgcggcgccatcccg
gccgagttgatggaaagcgagttcttcggtcacaaaaaaggcagcttcaccggcgcggcc
ggcgacaaggaagggctgttccaggctgccagcggcggcaccctgttcctggacgaggtc
gccgaactgcccctgcacatgcaggtcaagctgctgcgcgccatccaggagaaggccgtg
cgcccggtgggcgagcagcgcgaggcgccggtggatgtacgggtgctgaccgccacccac
aagaacctggagcagctggtgcgcgacggccacttccgccaggacctgtacttccgcatc
aacgtgatcgaactcaaggtcccgcccctgcgcgagcggcgcgaagacatcccccggctg
gtcgagcacctgctgaacaagctcggccacgacgcccggcaccggctgagcgacaccgca
gtgcaggccctgcaggcctacgacttcgccggcaacgtgcgcgagctggaaaacatcctg
gaacgcgctgtcaccatggccgaaggcgaggtgatcgaggtcgaagacctgcacctgcag
acgaacacggcaagcgagcaaccgaccacggccggtaatccaccgccgcccggcagcgtc
ccgctggaggactacctgggcgagatcgagaaacaggcgatactggatgccctggaacag
acccatcagaacaagaccgccgccgccgaactgctgggcctgagtttccgcgccctgcgc
taccgccttaagaagctgggactggactga
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