Thiomicrorhabdus sediminis: FE785_00010
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Entry
FE785_00010 CDS
T05983
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03030
DNA replication
thig03430
Mismatch repair
thig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE785_00010 (dnaN)
03430 Mismatch repair
FE785_00010 (dnaN)
03440 Homologous recombination
FE785_00010 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thig03032
]
FE785_00010 (dnaN)
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_00010 (dnaN)
Enzymes [BR:
thig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE785_00010 (dnaN)
DNA replication proteins [BR:
thig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FE785_00010 (dnaN)
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FE785_00010 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
SPP1_Dit
Motif
Other DBs
NCBI-ProteinID:
QCU89123
UniProt:
A0A4V1HHI3
LinkDB
All DBs
Position
1486..2595
Genome browser
AA seq
369 aa
AA seq
DB search
MKITLTRENLLKVLQTVGGVVEKRQTMPILGNVLFQVSENTLTVTASDLEIETRAQTELE
SCEVSQFAITLPAMKLINIVRSLPDGLTIVLDFEESRCTLSAGRSRFKLSTLPAEDFPTI
DLTQTDMSFALSQHQLKQLIAHSSFAMASQDVRFYLNGMLFDISNQALRVVATDGHRLST
CSTNLAIDGLTPTQAILPRKGVLELSKLIGDDDALIEFALAKNYLTVQFEETVFTCKLVD
GRFPDYRRVIPSTNDQMIQTDRELLRSLLQRASILSNDKFKGIRLVLSNNLLAVNASNSE
QDESHEDMAIDYQGSEMEIGFNVNYILDVLNSMSEDCVTLQLKDANSSCLIEANTDACHC
QHVIMPMRL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcactttaacgcgtgaaaaccttttaaaagtcttgcaaaccgtcggcggcgtg
gtcgaaaaaagacaaaccatgcccattttaggtaatgtcctgtttcaggtatcggaaaac
accctaaccgttaccgcttcagacttagaaatcgaaacccgtgcgcaaaccgaactggaa
tcctgcgaagtcagtcagttcgccattacgctgccggcaatgaaactgattaatatcgta
cgctctctacctgatggcctgaccattgtcctcgactttgaagagtcgcgttgtaccctg
tctgccggtcgttcccgctttaagttgtcgacccttccggcagaagatttcccaactatc
gatttgacacaaaccgatatgtcattcgctctatcgcaacatcagttgaagcagttgatc
gcccattcaagctttgccatggcaagccaggatgtgcgtttttacctgaacggtatgctg
tttgatatcagcaaccaagctctgcgcgtggttgcgactgacggacaccgtctatcgacc
tgctcgaccaacttggcaattgacggcctgaccccaacgcaggcaatcctgcctcgtaaa
ggggtattggaactgtcgaagctaatcggtgatgacgatgcgctaatcgaattcgcgctg
gcgaaaaactacctgaccgttcaattcgaagagactgtctttacctgtaagttggttgac
ggtcgtttcccggattaccgtcgcgtgattccaagcaccaacgatcaaatgatccagaca
gaccgcgaattgttacgcagcctgttacagcgtgcgtcgatcctgtccaacgataaattc
aaaggcattcgtctggtactgagcaataacctgcttgcagttaatgcctcgaacagcgaa
caagacgaatcccatgaagatatggcgatcgactatcagggttcggaaatggaaatcggt
ttcaatgtgaactatatccttgatgtgttgaactcgatgtccgaggactgtgtcacattg
caattgaaagacgccaacagcagctgtttgattgaagccaataccgatgcatgtcactgc
cagcacgtcattatgccgatgcgcctgtag
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