KEGG   Thiomicrorhabdus sediminis: FE785_00125
Entry
FE785_00125       CDS       T05983                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig03030  DNA replication
thig03410  Base excision repair
thig03420  Nucleotide excision repair
thig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FE785_00125 (polA)
   03410 Base excision repair
    FE785_00125 (polA)
   03420 Nucleotide excision repair
    FE785_00125 (polA)
   03440 Homologous recombination
    FE785_00125 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thig03032]
    FE785_00125 (polA)
   03400 DNA repair and recombination proteins [BR:thig03400]
    FE785_00125 (polA)
Enzymes [BR:thig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FE785_00125 (polA)
DNA replication proteins [BR:thig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FE785_00125 (polA)
DNA repair and recombination proteins [BR:thig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FE785_00125 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FE785_00125 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 Prok-E2_E HHH_2 Shugoshin_N
Other DBs
NCBI-ProteinID: QCU89144
UniProt: A0A4P9K2S2
LinkDB
Position
25219..28041
AA seq 940 aa
MTESNSAITFNPDSPFILVDGSSYLFRAFHAMPPLTNSKGDATGAIFGVINMLGKLIEQY
QPEKMAVIFDAKGKTFRHDMYSEYKSHRPPMPEELASQIEPIHEIVKALGLPLICIEGVE
ADDVMGTLAHQASLVEHDTLISTGDKDLAQLVNEHVTLINTMNDTLSTPDSVVEKFGVRP
DQIIDYLALVGDSADNIPGIPKCGPKTAVKWLTSFGNIDNLMENAPMIGGKIGENLRNNL
DQLKLSRELTTIRLDCDLPIGLNDIQRQPADLQRLQELFSEYELRTWLNQVMKGETPFSK
SNGAKAHSQTVTKKSAQPDETNPVETTVAEKADSQYETVFSAEQFNKWLALIENTELFAI
DTETTSLNTQQAQVVGICLAVKNPDKAGNLACYIPLAHDYEGAPAQLDLNDTLNRLKPIL
ENPNVAKCGQNLKYDWHVLQNHGITLQGMKFDTMLESYCLNSVATRHNMDDLALKYLNHR
TTHFEEIAGKGKKQLTFNQIEIETAAHYAAEDADITLQLHQTLYPQLTAEQSLVNVFNDI
EMPLMPVLAHMERNGVLLDTEMLAKQSQEISAKLTELEQKAHLLAGENFNLNSSKQLQVI
LFENLELPIIKKTPKGQPSTAEPVLVELAEQGHEMPNLILEYRSLAKLKSTYTDSLPKQI
EQKSGRVHTSYQQAVASTGRLSSTEPNLQNIPIRSAEGRRIRQAFIARPGYKLIAADYSQ
IELRIMAHLSADNGLLTAFAEGRDIHQATAAEIFGVELNEVTTEQRRSAKAVNFGLIYGM
SAFGLAKQLNVPRGVAQEYIDLYFSRYPGVLEYMDRTKDFAKANGYVETLMGRRLYLPDI
NARNGQLRQYAERTAINAPMQGTAADIIKTAMIKIEAWLKDCEFDIQMIMQVHDELVFEV
KEDQIDAVRPHIKELMEGALKLDVPLIVEIGQGNNWDEAH
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgaccgaatcaaattcagcaatcacctttaaccctgacagcccatttattttggtggac
ggttcttcttaccttttcagagccttccatgccatgccgccgctgacaaactctaaaggt
gatgcgacgggggcgatattcggtgtcatcaatatgctcggtaaactgattgaacagtac
cagccggaaaaaatggcggtgattttcgatgccaagggaaaaacctttcgccatgacatg
tatagcgaatataaatcgcaccgcccgccaatgccggaagaacttgcctcacaaatcgaa
ccgatccatgaaatcgtcaaagccttaggcctgccgctaatttgcatagaaggggtcgag
gccgatgatgtcatgggcaccttggcgcatcaagccagcctagttgagcacgataccttg
atttccaccggtgataaggacttggcacagctggtcaatgaacatgtcacgcttatcaac
accatgaacgacaccttatccactccggatagtgtcgtggaaaagttcggtgtgcgtccc
gaccagattatcgattacctggctctggtcggtgatagtgccgacaatatcccgggcatt
ccaaagtgcgggccgaaaaccgcggtcaaatggctgacctctttcggcaatatcgataat
ttgatggaaaatgcgccgatgatcggcgggaaaatcggtgaaaacctgcgcaacaacctc
gatcaacttaaattatcacgagaactgaccacaattcgccttgattgcgacctaccgatt
ggccttaatgatattcagcgtcagcccgctgatttgcagcgtttacaagaactattcagc
gaatatgagctacgcacctggttaaatcaggtgatgaaaggcgaaacacctttctcgaaa
tcaaatggtgccaaagcacatagccagacggtaaccaaaaaatccgcccaaccagatgaa
acgaatccggtagaaaccactgttgccgaaaaagccgatagccagtatgaaacggtcttt
agcgcagaacagttcaataaatggctggcattgattgaaaataccgagctattcgcgatc
gataccgagaccacctcgttgaatactcaacaagctcaagtagtgggtatctgtctggcg
gtaaaaaacccggataaagccggcaacctggcttgttatattccattggcgcacgattac
gaaggcgccccggcacaattggatttaaatgacaccttaaatcgcctaaaacctattcta
gagaatccaaatgtcgctaaatgtggtcaaaatctaaaatatgattggcatgtgctgcaa
aatcacggtatcacacttcaaggtatgaagttcgacaccatgttggagtcttattgcctg
aacagtgttgccacccgtcataatatggatgacctggcactgaaatacctgaatcaccgc
accacccattttgaagagattgccggtaaaggtaaaaaacaactgactttcaaccaaatt
gagattgaaaccgccgcacattatgcagctgaagatgcggacatcactttacagctacac
caaacactttatccgcaattaacagcagaacaaagcttggtgaacgtatttaacgacata
gaaatgcctttaatgccagttttggctcacatggagcgtaatggcgtcttactggatacc
gagatgcttgccaaacaaagtcaagaaatcagcgccaagctgactgaactggaacaaaaa
gcgcatttactggccggagagaacttcaatttgaactcgtccaagcagttacaggtcatc
ctatttgagaatctggaactgccgattattaagaagacgccaaagggccaaccatcaacg
gctgaaccagttttagtggaactggccgagcaaggccatgaaatgcccaatctgattttg
gaataccgttctttggcaaaactgaaatcgacctataccgattctctaccaaagcagatc
gaacagaaatccggccgtgtgcatacctcttaccagcaagccgtggcatccaccgggcgt
ttgtcatcaaccgaaccgaacctgcagaatatccctattcgttccgccgaaggccgtcgt
attcgtcaggcttttatcgctcgtccgggctataagctaatcgccgccgactactcgcaa
atcgagttaagaattatggcgcatctttccgccgataatggattgttgaccgccttcgcc
gaaggccgagatatccaccaagccaccgctgcagagatttttggtgttgagttaaacgaa
gtcactacagaacagcgtcgcagcgccaaggcggttaacttcggtttaatctacggcatg
tcggcatttggtttggccaaacaattgaatgtaccgcgtggcgtagcgcaggaatatatc
gacctgtacttctcacgctaccctggtgtgttggagtatatggatcgtaccaaggatttc
gccaaggccaacggttatgttgaaaccctgatgggtcgacgtctctatctgccggatatc
aatgcgcgtaacggccaattaagacaatacgccgaacgcaccgcgatcaatgcacctatg
cagggaaccgcagccgatattatcaaaaccgcgatgataaaaatcgaagcctggctaaaa
gactgtgaattcgatattcaaatgattatgcaagtacacgatgaattggtatttgaggtc
aaggaagaccagatcgatgccgtgagaccgcacattaaagagcttatggaaggcgcttta
aagctcgatgtgccactgattgttgaaatcggtcagggtaataattgggatgaggctcac
taa

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