Thiomicrorhabdus sediminis: FE785_00690
Help
Entry
FE785_00690 CDS
T05983
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00860
Porphyrin metabolism
thig01100
Metabolic pathways
thig01110
Biosynthesis of secondary metabolites
thig01120
Microbial metabolism in diverse environments
thig01240
Biosynthesis of cofactors
Module
thig_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
thig_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
FE785_00690 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thig04147
]
FE785_00690 (hemB)
Enzymes [BR:
thig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
FE785_00690 (hemB)
Exosome [BR:
thig04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FE785_00690 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QCU89247
UniProt:
A0A4P9K4V5
LinkDB
All DBs
Position
complement(165352..166356)
Genome browser
AA seq
334 aa
AA seq
DB search
MLNRQFPITRMRRMRKDDFSRRLMRENQLTASDLILPMFVIEGHNKREAVKSMPGVERLS
IDLLVTEAQEVAALGIPMIAIFPVTPLEAKSLDAAEAYNPEGLAQRAVRAVKAACPELGV
MTDVALDPFTTHGQDGIIDEDGYVLNDDTIDVLMQQALSHAEAGADVIGPSDMMDGRIIE
IRELLEDHGHINTRIMAYSAKYASSYYGPFRDAVGSAGNLGKGNKNTYQMDPANRNEALH
EVAMDLNEGADMVMIKPGLPYLDIVRDIKDNFKAPTYVYHVSGEYAMLKAAAEKGWIDEK
PVVLETLLSCKRAGADGILTYYAKLAAIWLKEQQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaccgccaattcccgattacccgtatgcgccgcatgcgcaaagatgatttctcg
cgccgtttaatgcgtgagaaccaactcactgcaagcgatttgattctgccgatgttcgtt
attgaaggtcacaataaacgtgaagcggttaaatccatgccgggcgttgagcgtttaagt
atcgacttgctggtcaccgaagcccaggaagtcgccgctttaggcattccaatgattgcc
atctttccggtcaccccccttgaagcgaagtcactggatgcggctgaagcctacaacccg
gaaggcttggcgcaacgcgcggttcgtgctgtcaaagcggcttgtccggaattaggcgtt
atgaccgatgtggcgctagatccgtttaccactcatggacaagacggtattatcgatgaa
gacggttatgtcttaaatgacgataccatcgatgtattgatgcaacaggcgctatcgcat
gccgaggccggtgccgatgtcataggaccatcggatatgatggatggccgcattatcgag
attcgtgaattgctggaagaccacggtcatatcaatacccgtattatggcttactcggct
aaatacgcctcctcttactacggacctttccgtgatgcagtcggctcagcgggcaatctt
ggcaaaggcaataaaaacacttaccagatggatccggcaaaccgtaacgaagcgcttcat
gaagtggcgatggatctgaacgagggtgccgatatggtaatgatcaaaccgggactacct
tatttagatattgtccgtgacatcaaggataactttaaagcaccgacctatgtctaccat
gtcagtggtgaatacgcgatgctaaaagccgccgccgaaaaaggttggattgatgagaag
ccggtagttttggaaaccttattgagctgtaaacgtgccggagccgacggcatcctgacc
tactatgcgaaactggctgcgatctggcttaaggaacaacagtaa
DBGET
integrated database retrieval system
