Thiomicrorhabdus sediminis: FE785_00765
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Entry
FE785_00765 CDS
T05983
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FE785_00765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_00765
Enzymes [BR:
thig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE785_00765
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FE785_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
zinc-ribbons_6
Zn_Tnp_IS1
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QCU89261
UniProt:
A0A4P9K3N6
LinkDB
All DBs
Position
182047..184335
Genome browser
AA seq
762 aa
AA seq
DB search
MKQKIAKVAVPGPFLFPLDYLLPEVCVDAQAGMRVWVPFRNKKIVGLLMDVGEQSDYDDS
KTKSVLEVIDDEAILTADSLKLLQWASHYYHEPIGEVVQAALPKRLRAGEAAQIEGVTYW
QLSELGQQKSLDDIAKNALRQRELFSALQVHGKLNENQLNHRLQNWRAAAKTLAQKNWLE
SYPGPCLLESDYAAKPEHTLNEQQQAAVDAVVQSQIDNPSKQAGNMALVAQNYAPRFSAF
LLQGITGSGKTEVYLGMIDAMVKLGKQVLVLVPEIGLTPQMIQRFEAYLQTRVAALHSGL
NESERHCAWHMVRTNQVKVLLGTRSAVFAPFADLGLCIIDEEHDLSYKQQDGFRYSARDL
MIQRARQQNIPVVLGSATPSLESLYNAKMQRYQHLYLTQRAAQGAKLPQLKLLDIRGESI
QEGVSQSLKLTMQKHLAAGNQVLLFLNRRGFSPVLMCHECGWQASCPSCDANMTYHQTDA
LNDLGYLQCHHCDEQIVKPSLCPSCQSEEFVKVGQGTERLQETIESWFSDKRVLRIDRDT
TRLKGSISELTEQAKSGQADILIGTQMLAKGHDFPNVTLVGLVDIDQGLFSADYRAAERM
AQLVLQVAGRAGRGAKAGEVLIQTHHPDHPLLTSLVQHGYDRFAVKALAEREQACLPPYQ
YQVLFRAEAHNPDDAMHFLYSLKAGLENTAQQLDRGDDVEFWGPVSAPMLKRQGRFRFQL
MLQATNRGALHRMLNVMQPHILKSPLARKVRWSIDVDPQEMY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagaaaattgccaaagtagcggttcccggaccatttttgttccccttggattat
cttttacctgaggtctgtgttgacgcgcaggcgggtatgagggtttgggtgccgtttcgc
aataaaaaaatagttggcttgctgatggatgtcggagagcagtcggattatgacgacagc
aaaacaaaatcggtgcttgaggttatcgatgacgaggctatcttaacggcggattccctc
aagttattgcagtgggccagccattattatcatgaaccgattggcgaggtggttcaggcg
gctttaccgaaacgtttaagggccggtgaagcggcgcagatagaaggcgtcacctattgg
cagttgagtgaattgggccaacaaaaaagtctggatgatatcgccaaaaacgcattgcgc
cagcgagagttgttcagtgccttgcaagttcacggcaaactcaatgaaaatcagcttaac
catcgtttacagaattggcgcgcggcagccaaaacactggcacagaaaaactggctggaa
agttatcccgggccttgtctgctggaaagcgattacgctgcaaaacctgaacataccttg
aatgagcagcaacaagcggcggtcgatgcggtagtgcaatcacagatcgataacccatcg
aaacaggcaggcaacatggcgcttgtggcacagaattatgccccacggttcagcgcgttt
ctattacaaggtattaccggtagcggtaaaactgaagtctatctgggtatgattgacgcg
atggtcaagcttggcaagcaggtgttggttctggtgccggaaatcggtttgacaccgcag
atgatccaacgtttcgaagcctatctgcaaacacgcgttgccgcgttgcattccggtttg
aacgaatcggaaaggcattgcgcttggcatatggtcagaaccaatcaggttaaggtgtta
ttgggaacccgctcggcggtttttgcaccctttgccgatttgggtttgtgcattatcgat
gaagagcacgacctttcctataaacagcaggacggttttcgctatagcgcgcgtgattta
atgattcaacgtgcccgccaacaaaacattccggtggtactgggctctgccaccccgagt
ctggaaagcctttataacgccaaaatgcaacgctatcaacatttgtacctgacccaaaga
gcggcacaaggagctaaattgccgcagttgaaattgctcgatattcgcggggaatcgatt
caagagggggtgtcgcagtcattgaaattgacaatgcaaaaacaccttgcagcaggtaat
caggtactgttgtttctcaaccgtcgtggcttttcaccggtattgatgtgtcatgaatgc
ggttggcaggccagctgtccaagctgtgatgccaatatgacctaccatcagaccgatgcg
ctcaatgatttaggttatttacagtgtcaccactgtgatgaacagatagttaaaccgagc
ctttgtccgagctgtcaaagtgaagaattcgttaaggtcggccagggaaccgagcgtttg
caggagacaattgaatcgtggtttagcgacaaaagggttttgcgtattgatagagatacc
acccgtttgaaaggctctatttcggagttgaccgaacaggcgaaaagcggtcaggccgat
attctgatcggtactcagatgctcgccaaagggcatgatttcccgaatgtcaccttggtg
gggttggtcgatatcgatcaaggtttattcagcgccgattaccgtgccgctgaacgcatg
gcgcagttggtcttgcaggtggccggaagagccggtcggggtgccaaagccggtgaggta
ttgattcagacccaccatccggatcatccgttattgacctctctggtacagcacggttat
gaccgttttgccgttaaagccttggctgagcgtgaacaagcctgtttgccgccttaccaa
tatcaggtgctgtttcgtgccgaggcgcacaaccctgacgatgccatgcactttctttat
tcattgaaagccggtctggaaaacaccgcgcaacagttagatcgtggcgatgatgtcgag
ttttgggggccggtcagcgctcctatgttaaaaaggcagggacgtttccgttttcagttg
atgctgcaggcgaccaaccgaggtgcattgcatcgtatgcttaatgttatgcagccgcat
atcttaaaaagtccgttggcacgcaaggtgcgttggtcgatagatgttgacccgcaagag
atgtattaa
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