KEGG   Thiomicrorhabdus sediminis: FE785_01045
Entry
FE785_01045       CDS       T05983                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig02020  Two-component system
Brite
KEGG Orthology (KO) [BR:thig00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FE785_01045
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:thig02022]
    FE785_01045
Two-component system [BR:thig02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   FE785_01045
SSDB
Motif
Pfam: Response_reg Sigma54_activat Sigma54_activ_2 AAA_lid_14 HTH_8 DUF229 AAA_18 TrmB AAA_16 IIGP Hib_C AAA_22 HTH_7 DUF7317 DUF7116 IstB_IS21 TP_0454_N
Other DBs
NCBI-ProteinID: QCU89315
UniProt: A0A4P9K3B3
LinkDB
Position
complement(244629..245969)
AA seq 446 aa
MKPGKLLIVDDEKDIRSLMEEIFAEEGYQVETAANGVQAQAAWRKFMPDIIFLDVWMPDI
DGISLLKQMHEEGVLEHSKVIMMSGHGTIETAIEATRLGAYDFLEKPLSLAKLIVTAERA
LEHSQLHQENRQLKQKQPEQYLPIGKSKAVIQLRETLDRLSKFTMPILVTGEPGTGKHHF
GQAIHKTSQRAQNMLREFHAQDFNILCQPDNQGNLKKALRELRQGTLLIGHIEQLSESAQ
ALLAGIVLNQSYQLEGQEEPMSTDIRLIALSRGDIEDAVNQRKFREDLYQRLKVMQIHIP
ALRQHTEDIPELIDYFVNHFVTLEGLEYRHFSVPAQNILRQHNWPGNLKELQNLIQRLLI
LGNDEVDDEEVKEIINQIRSKDSAGEVVDTSVPLKTAKEQFEGRYISQLLRETGGNVSET
AKRSGVDRTNLYRKLKNLGIDPKNPQ
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaaacccggcaaactgttaatcgtcgatgatgaaaaagatatccgtagcctaatggaa
gagatcttcgcggaagagggctaccaagtggagaccgccgccaatggcgtgcaagcacaa
gccgcgtggcgtaagtttatgcccgatattatcttcctcgatgtctggatgccggatatt
gacggcatctccctgcttaagcagatgcatgaagaaggtgttctcgaacacagcaaagtc
attatgatgtccggccacggtaccatcgaaaccgctatcgaagcgacccgtctcggggcc
tatgactttctcgagaaaccgctctcgctggcaaaactgattgtcaccgcggaacgcgct
ctagaacacagccaactgcatcaggaaaaccgtcagcttaaacagaagcagccggaacaa
tacctacctatcggtaaaagcaaggcggtcattcaattgcgtgaaacgctcgatcgttta
tcaaaattcaccatgccgattctggtcacaggtgagcccggtaccggcaaacaccatttt
ggtcaggcgattcataagacctcgcagcgcgcgcagaacatgctgcgtgagttccatgcc
caggatttcaatatcctctgtcagccggacaatcaaggcaacctgaaaaaggccttgcgc
gaactgcgccaaggcactttgcttatcggacatatcgaacagcttagtgaaagcgctcaa
gccctattggcgggcattgtcctgaatcaatcctatcagcttgaaggtcaagaagagccg
atgagcaccgatatcaggctgattgcattgagtcggggcgatatcgaagacgcggtcaat
caacgcaagttccgtgaagacctgtaccagcgcctgaaggtcatgcaaatccatattccg
gcattacgtcaacataccgaagacattcctgaactgatcgattatttcgttaatcacttc
gttaccttggaaggtcttgaatatcgccatttcagcgtaccggcacaaaatatcctgcgc
cagcataactggccgggtaatctcaaagagctgcaaaacctgattcaacgcctgcttatt
ttgggtaatgacgaagtcgatgacgaggaagtcaaagagattatcaaccagattcgcagc
aaggattccgccggcgaagtggttgataccagtgtcccgctgaaaaccgccaaagagcag
tttgaaggccgctatatcagccagctattgcgtgagacgggaggcaatgtctcagaaacc
gcgaaacgttccggcgtggacagaaccaacctttaccgaaaattgaaaaacctcggcatt
gacccgaaaaacccccaataa

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