KEGG   Thiomicrorhabdus sediminis: FE785_01165
Entry
FE785_01165       CDS       T05983                                 
Symbol
rep
Name
(GenBank) DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
thig  Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:thig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thig03400]
    FE785_01165 (rep)
Enzymes [BR:thig01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FE785_01165 (rep)
DNA repair and recombination proteins [BR:thig03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FE785_01165 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 DEAD ResIII PSD2 SMC_N RuBisCO_large
Other DBs
NCBI-ProteinID: QCU89337
UniProt: A0A4P9K540
LinkDB
Position
complement(275966..277996)
AA seq 676 aa
MHSLNDRQREAVKHIETPALVLAGAGSGKTRVITEKIAYLIRQCDVKPHNIYAVTFTNKS
AKEMKERVTKLLKDENTSGLNVSTFHNLGLNIIRREYKALGYKSNFSIMDAADAAQILKE
LMHKQDIDPEALEGAQWDISAWKNQHINPQQALEMAEDAQQQARAIIYAAYEKQLKAYNA
VDFDDLIGLPVRLFNENAEILQKWQNRVRYLLVDEYQDTNAAQYALVKQLVGVQARFTVV
GDDDQSIYAWRGAQPENLVLLKEDFPSLKLIKLEQNYRSSNRILQSANTLIANNPHVFEK
TLWSEMGMGDHLRVIACASETQEVERVVSEIIVHKFKNRTKNRDYAILYRGNHQARLMER
ALREQNIPYVISGGKSFFDHAEIKDIMSYLRIIVNPDDDAAFLRIVNTPRREIGASTLEK
LATYATGRDISLFDATQEFGLTTILADKALKRVQHFGNQLLDWIKQADSAQGEEVISFVR
QLIETIEYDNWIHENSSNPKTAERRINNVRELVLWIERIINKALEEDGEEKRLETIVTHM
ALMDMMERNESEQEHDMVSLMTLHASKGLEFPHVFLIGMEEELLPHKQNLESPGLEEERR
LAYVGITRAQRSLTMTYATKRKKYGEEMACDPSRFLHELPTELLHWEGKPGVVVSKEEQV
EHGNAQLANLRSMLKR
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgcacagcctgaatgatcgtcaacgcgaagcggtaaaacatattgaaacgccggcactg
gtattagccggagccggatcgggcaaaacacgtgtaatcactgaaaaaattgcctattta
attcgtcaatgcgatgtcaaacctcacaatatctatgcggtgacctttaccaataagtcc
gccaaggaaatgaaagaacgtgtcaccaagctgctaaaagacgaaaacaccagcggtttg
aatgtatcgaccttccacaaccttggcctgaatattatacgccgcgaatacaaagctctc
ggctataaatcgaatttctcgattatggatgcggccgacgccgcgcaaattctgaaagag
ctgatgcataaacaggatatcgacccggaagccttggaaggcgcgcaatgggatatttcg
gcctggaagaaccagcatatcaatccgcaacaggcactggagatggccgaagacgcccaa
caacaggcacgcgcaatcatctatgcagcttatgaaaagcagcttaaagcctataatgcg
gtcgattttgacgacctgatcggcttgccggtgcgtctcttcaatgagaatgccgaaatt
ctgcaaaagtggcaaaaccgggtgcgctacctgctggtggatgagtatcaggataccaat
gcggcccagtatgcgctggttaaacagctggttggcgttcaagcccgttttaccgtggta
ggtgatgatgaccaatcgatctatgcctggcgtggcgctcagccggaaaacctggttctg
ctaaaagaggatttcccttccttaaaactgattaagcttgaacagaactatcgttcaagt
aaccgtatcctgcaatcggccaacactcttatcgccaacaatcctcacgttttcgagaag
acactctggtcggaaatgggaatgggagaccatctgcgtgtaattgcctgtgccagcgaa
acccaggaagtcgagcgcgtggtgtcggaaatcattgtgcataaattcaaaaaccgcacg
aaaaaccgtgactatgcgattctatatcgaggcaaccatcaggctcgtttaatggaacgc
gcgctgcgcgaacaaaatattccttatgttatttccggcggtaaatcgtttttcgaccat
gctgaaatcaaagatatcatgagctatctgcgtattatcgttaacccggacgatgatgcg
gcgttcctgcgaatcgtcaatacacctcgccgtgaaatcggtgccagcaccttggagaaa
ctggcgacctatgcaaccggtcgagacatcagtttatttgacgctacccaggaatttggt
ctcaccactattcttgccgataaggccttaaaacgtgttcagcattttggcaaccaacta
cttgattggatcaaacaagccgatagcgcacagggtgaagaagtcatctcatttgttcgc
cagctcattgaaaccattgaatatgacaactggattcatgaaaactcgagtaacccgaaa
acggcagaacgtcgcatcaataacgtacgagaactggtgctatggattgagcgcattatc
aataaggcgcttgaagaagacggcgaagaaaaacgcctggaaaccattgtcacccatatg
gcgttaatggatatgatggaacgcaatgaatccgagcaggaacacgacatggtcagctta
atgactctgcacgcctccaaaggactcgaattcccccacgtatttctgatcggtatggaa
gaagaactgctgccgcataaacagaacctagaatcaccaggactggaagaggaacgccgc
ttggcctatgtaggcattacccgtgcacaacgttccttgactatgacctatgccaccaag
cgcaaaaaatatggtgaagagatggcctgtgacccgagccgttttctgcacgagctaccg
acagaactattgcactgggaaggcaaaccgggtgtcgtggtttccaaggaagaacaggtt
gagcacggtaatgcacaactggccaatcttcgttccatgttaaaacgctag

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