Thiomicrorhabdus sediminis: FE785_01820
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Entry
FE785_01820 CDS
T05983
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FE785_01820 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thig03019
]
FE785_01820 (groL)
03110 Chaperones and folding catalysts [BR:
thig03110
]
FE785_01820 (groL)
03029 Mitochondrial biogenesis [BR:
thig03029
]
FE785_01820 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thig04147
]
FE785_01820 (groL)
Enzymes [BR:
thig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FE785_01820 (groL)
Messenger RNA biogenesis [BR:
thig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FE785_01820 (groL)
Chaperones and folding catalysts [BR:
thig03110
]
Heat shock proteins
HSP60 / Chaperonin
FE785_01820 (groL)
Mitochondrial biogenesis [BR:
thig03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FE785_01820 (groL)
Exosome [BR:
thig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FE785_01820 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FE785_01820 (groL)
Exosomal proteins of breast cancer cells
FE785_01820 (groL)
Exosomal proteins of colorectal cancer cells
FE785_01820 (groL)
Exosomal proteins of bladder cancer cells
FE785_01820 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SnoaL_4
CbiA
Motif
Other DBs
NCBI-ProteinID:
QCU89459
UniProt:
A0A4P9K3K9
LinkDB
All DBs
Position
406697..408334
Genome browser
AA seq
545 aa
AA seq
DB search
MGAKDVKFGLDAREKMVDGINILANAVKVTLGPKGRNVVLEKTFGAPTVTKDGVSVAREI
ELEDKFMNMGAQMVKEVSSQTNDVAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLNRGI
HKAVEAVVAELQGMSVPCKTTESIAQVGTISANSDSAVGKMIAEAMERVSTEGVITVEEG
SSLQDELVVVEGMEFDRGYLSPYFVNNQDKMVAELENPYILLHDKKISNIRDLLPTLEAV
SKTGRPLLIIAEDVDGEALATLVINNMRGIVKVAAVKAPGFGERRKAMLQDMAILTGGTV
ISEEVGLSLDAITLDVLGETKSAVVGKDTTKLIDGNGAKEDIDARCAQIKAQQDASTSDY
DKEKLGERLAKLAGGVAVIKLGAATEMEMKEKKDRVDDALHATRAAVEEGIVPGGGVALV
RASSKVTVEGDNDDQNVGIQIALRSMQEPMRQIAANCGLEGSVIVNKVLEGEGNFGFDAA
KEEYVDMIEAGIIDPAKVTRSAIQNAASVAGLVLTTGAAIADSDSADPAADAAAQGYTQG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggagctaaagacgttaagtttggtttagacgctcgtgagaaaatggttgatggtatc
aacattcttgctaatgcagttaaagtgacactaggtccaaaaggacgtaacgttgttcta
gaaaaaacttttggtgcgccaacagtgactaaggatggtgtatcggttgcacgtgagatc
gaacttgaagacaagtttatgaatatgggtgcgcagatggttaaagaagtgtcatctcag
accaacgatgtggctggtgacggtacaaccactgcgacagttctagcgcaagcgattgtt
cgtgaagggatgaaatcggttgcagcgggtatgaatccgatggatttgaaccgtggtatt
cataaagcggttgaagcggttgttgcagagcttcaaggtatgtctgttccatgtaaaact
actgaatctatcgctcaggttggtacgatttcagctaactctgattcggcagtaggcaag
atgatcgccgaggcgatggagcgcgtgtcaactgaaggtgttatcactgttgaagaaggt
tcttctttgcaggatgagctagtcgtcgttgaaggtatggaattcgatcgtggttaccta
tcaccatatttcgtcaacaaccaggacaagatggttgctgaattggaaaatccatacatc
ctgttgcacgataagaaaatctcaaatatccgtgatttgctaccaaccctggaagcggta
tcaaaaacaggtcgtcctctattgattattgccgaagacgttgatggtgaagctctggcg
acgctagttatcaacaatatgcgcggtatcgttaaggttgcggcggttaaggctcctggt
tttggtgagcgtcgtaaagccatgctgcaagatatggccatcctgactggtggtactgtt
atttctgaagaagtgggtctgtctctagatgcgatcactttagatgttcttggtgaaacc
aagtcggcggttgttggtaaagatacgactaaactaatcgacggtaacggtgcgaaagaa
gatatcgatgctcgttgcgcgcaaatcaaggcgcagcaagatgcttctacttctgactac
gacaaggaaaaactgggtgagcgtttagcgaagcttgccggtggtgttgccgttatcaag
cttggtgccgccactgaaatggaaatgaaagagaagaaggatcgtgttgacgatgcattg
cacgcaacgcgtgccgcggttgaagaaggtattgtgcctggtggtggtgttgcgctggtt
cgtgcttcatcaaaagttaccgttgaaggggataacgatgatcagaatgtaggtatccaa
attgctttgcgttcgatgcaagagccaatgcgtcagatcgctgcaaactgtggtcttgaa
ggttctgtgattgttaataaggtgcttgaaggtgaaggtaacttcggtttcgacgccgcc
aaagaagaatatgtcgatatgatcgaagccggtatcatcgaccctgcgaaagtaacgcgt
tctgcaattcagaacgctgcgtcggtggccggtctggtattgaccacaggtgccgcaatt
gccgattctgacagtgctgatccagcagcggatgcggcggcacaaggttacactcaggga
atgggtggcatgatgtaa
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