Thiomicrorhabdus sediminis: FE785_01960
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Entry
FE785_01960 CDS
T05983
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE785_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_01960
Enzymes [BR:
thig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FE785_01960
DNA repair and recombination proteins [BR:
thig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FE785_01960
Prokaryotic type
FE785_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCU89486
UniProt:
A0A4P9K5F7
LinkDB
All DBs
Position
complement(433692..434375)
Genome browser
AA seq
227 aa
AA seq
DB search
MTNNNIQLDPSWLKYLQAEFDEPYMQQLKQHLSNEKQAGKTILPQGNLWLNALNSTPLQQ
VKVVILGQDPYPTIGHPHGLCFSVMPDVSPLPKSLLNINKELLEDLGIDNSHSGYLQPWA
DQGVLLLNAVLTVEAGKANAHQGLGWERFTDKIIELINQQCEHVVFILWGAYAQKKGAAI
DTNKHLVIKSPHPSPLSAYRGFFGSRPFSQANHYLIQHGKPPINWQL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaacaatatccaactcgatccaagctggctcaaatacctgcaagcagaattt
gatgagccttatatgcaacaactcaaacaacatttaagcaatgaaaaacaggccggtaaa
accatactgccacaaggcaacctctggcttaatgcattgaacagcaccccgttgcaacag
gtcaaggtcgttattctcggtcaagacccgtatccgaccatcggccacccacacggcctg
tgcttctcggtgatgccggatgtctcacccttgcctaaatcgcttttgaatatcaataaa
gaactacttgaagaccttggcattgataactctcatagcggctatctgcaaccttgggca
gaccaaggggtattgctgctaaatgcggtattaacggttgaggccggcaaggcaaatgct
catcaaggactgggttgggaaaggtttaccgataagattatcgagctgatcaaccagcaa
tgcgagcatgtggtgtttattctctggggagcctatgctcagaaaaaaggcgccgcgatc
gatacaaacaaacatttggtgattaaaagccctcacccttccccgctttcagcctataga
ggctttttcggtagccgccctttctcacaagccaaccattacctaattcaacacggcaaa
ccgcccatcaattggcaactttaa
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