Thiomicrorhabdus sediminis: FE785_02450
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Entry
FE785_02450 CDS
T05983
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FE785_02450 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_02450 (uvrB)
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE785_02450 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FE785_02450 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
AAA_30
DNA_pol_A
AAA_16
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QCU89575
UniProt:
A0A4P9K3V5
LinkDB
All DBs
Position
546158..548188
Genome browser
AA seq
676 aa
AA seq
DB search
MSKAFELVSQYQPNGDQPTAIAKLVEGIENGEAYQTLLGVTGSGKTFTVANVVKTIQRPT
IILAHNKTLAAQLYGEMKGFFPNNAVEYFVSYYDYYQPEAYVPASDTYIAKDSSVNEQIE
QLRLSATKALLEREDVILIATVSAIYGLGDPEMYLKMILQVRLGDTISQRDILARLTSMQ
YTRNDVELWRGTFRVRGDVIDIFPAEAEEYAVRIELFDDEVENIGWFDPLTGEIIAKVTR
VTVYPKSHYVTPRERTLQVVEQVKVDLKERLEQLRSMNKLVEAQRLEERTKLDIEMMVEL
GYCTGIENYSRYLSGRNAGEAPPTLMDYLPKNALMVIDESHVTIPQIGGMYKGDRSRKEN
LVTYGFRLPSALDNRPMKFEEFERAMPQTIFVSATPGNYEAEHCPEMIEQVVRPTGLLDP
ELEVRPATTQVDDLLGEIRLRAEKNERILVTTLTKRMAENLTEYLEDHQVRVRYMHSDID
TVERIEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNVEGKAILYADKITKSMKKAIDETERRRAKQMQYNLDHGITPQGLNKKVSDILEGSP
YSSKSSRKQSATKAAEKTQQYTSTPEMTPAQLASHIKKLEKQMYKAAKDLDFEAAAQLRD
EVKTLKTNMVGIGDLR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaagcatttgaactcgtttcgcaatatcagcctaatggagaccagccgaccgca
attgccaaattggtggaaggaattgaaaacggggaagcttatcaaacgcttttaggggtc
accggttctggtaaaaccttcacggtggcgaatgtggtcaaaacgattcagcggcctacc
attatcctcgcccacaataaaaccttggcggctcagctttatggcgagatgaaaggcttt
tttcctaataatgcagtggaatattttgtctcctattacgattactatcaaccagaagcc
tatgtaccggcttcggatacctatatcgccaaggattcatcggtcaatgaacagatcgag
cagctgcgattgtccgccaccaaagcattgctggagcgtgaggatgtgattctgatcgcc
acggtatcggcgatttacggtttgggtgatccggaaatgtatttgaagatgatccttcag
gtgcgcttgggcgataccatcagtcagcgagatattttggctcgtttgacttcgatgcaa
tacacccgcaatgatgtcgaactgtggcgcggtacttttcgagtgcgcggtgatgtgatt
gatattttcccggcggaagccgaagagtatgcggtacgtatcgaattattcgatgacgag
gtcgaaaatatcggctggtttgatcctttaaccggcgagatcattgccaaggtgactcgt
gtcacggtctatcctaaatcgcattatgtaacacctagggaacgcaccttgcaggtggtc
gaacaggttaaggtggatttgaaagagcgtttggaacagttacgttcgatgaataagctg
gttgaggcgcagcgccttgaagagcgcaccaagcttgatatcgaaatgatggttgagctc
ggatactgcaccggcatcgagaactattcacgctatctctccgggcgcaatgccggggaa
gcgccaccgaccttaatggactatttgccaaaaaatgcgttgatggtgattgatgaaagc
catgtcaccattccgcaaatcggcggcatgtacaaaggcgaccgctcgcgtaaagagaat
ctggtgacttacggtttccgcctgccatcggcgttggataaccgtccgatgaagttcgaa
gagttcgagcgcgctatgccgcagacgatttttgtgtcggcaacccccggtaattatgaa
gccgagcattgcccggagatgatcgagcaggtggtgcgtccgaccggcttgttggatccc
gaattggaagtccgtccggcaaccacccaggtcgatgacctgcttggtgaaattcgttta
cgcgccgaaaagaatgagcgcattctggttactaccttgaccaaacgtatggcggagaat
ttgaccgagtatctggaggatcatcaagtgcgtgtgcgctatatgcactcggatatcgat
acagtggagcgcattgagattatccgtgatttgcgtttaggcgagttcgatgtgctggtg
gggattaacctgttgcgagaagggttggatattccagaagtgtccctggtggcgattttg
gatgcggataaggaaggttttttacgttccgagcgttcattgattcagaccattggccgt
gcggcgcgaaatgttgaaggtaaagcgattctttatgccgacaaaatcaccaagtcgatg
aaaaaggccattgatgaaaccgagcgccgtcgtgccaaacagatgcagtacaatttggat
cacggcattaccccgcaaggtttgaacaaaaaggtcagcgatattcttgaaggttctcct
tatagcagcaaatcatcacgtaaacagtctgcgacaaaagccgctgagaaaacacagcaa
tatacgtcaacaccggagatgaccccggctcagttggcaagtcatatcaagaagttggaa
aaacagatgtataaagcggccaaggatctcgattttgaagccgccgcgcagcttcgcgac
gaggtgaaaaccttgaaaactaatatggttggcattggtgatttaaggtag
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