KEGG   Thiomicrorhabdus sediminis: FE785_02785
Entry
FE785_02785       CDS       T05983                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig02024  Quorum sensing
thig03060  Protein export
thig03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:thig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FE785_02785
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FE785_02785
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FE785_02785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:thig02044]
    FE785_02785
Enzymes [BR:thig01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FE785_02785
Secretion system [BR:thig02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FE785_02785
  Eukaryotic Sec-SRP protein
   FE785_02785
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA cobW Zeta_toxin AAA_16 ABC_tran YqeC ATP_bind_1 KTI12 AAA_30 Helicase_RecD Thymidylate_kin AAA_14 NACHT T2SSE AAA_19 nSTAND3 AAA_33 FliD_C AAA_31 APS_kinase DO-GTPase1 MobB ArsA_ATPase ATPase_2
Other DBs
NCBI-ProteinID: QCU89636
UniProt: A0A4P9K5T7
LinkDB
Position
616885..618270
AA seq 461 aa
MFDNLSDRLNKTFKAIRGQGRLTESNIKDALRDVRRALLEADVALPVVKSFITKVQERAV
GQEVSSSLNPGQAFIKIVREQLAEVMGAEAEPLNFNVEPPAVVMVAGLQGAGKTTSIGKL
AKWLKEREKKKVMVVSADVYRPAAIKQLETLAEQVDVLFYPSTAEQDPVDIARNAHAEAK
KQFVDVLLLDTAGRLHIDNEMMQEVQRLHSSINPCETLFVVDSMTGQDAANTAKAFNDAL
PLTGVILTKTDGDARGGAALSIREITGKPIKFIGAGEKTDALEPFHPDRMAGRILGMGDV
LSLIEEAEAKIDQKKAQKFAQKVQKSGQFDLEDFLEQLQQINNMGGVGGLMGKLPGMDQL
KGQVDGDKAEKEFKRLEAIIYSMTKQERRFPAVIKGSRKRRIAAGSGTSVPDVNRLLKQF
TQMQKMMKKMKGGGMKNLMRGLAGKLPPGMGGMGGLPPGMR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtttgataatttatcggatcgtttaaataagacctttaaagcgatacgaggccaaggt
cgattaacggagtccaatattaaggatgcattgcgcgatgtgcgtcgtgctctgttagag
gccgacgtggccttgcctgtggtgaagtcgtttattaccaaagtgcaagagcgcgccgtt
ggtcaggaagtctccagcagcctgaatcctggacaggcctttattaagattgtccgcgaa
cagttggccgaggtcatgggggcggaagccgaaccgttgaacttcaatgtcgagccgccg
gcggtggttatggttgccggtttgcagggtgcaggtaagaccacctctatcggtaagctg
gctaaatggcttaaggaacgcgaaaagaaaaaagtcatggtggtttccgccgatgtttat
cgtcctgcggcgattaagcagttggagactttggccgaacaggttgatgtgctgttctat
ccatcaacggccgagcaagaccctgtagatatcgcacgcaatgcacatgccgaagcgaaa
aaacaatttgttgatgtattgcttttggataccgcagggcgtttgcatatcgataatgaa
atgatgcaggaagtacaacgcctgcatagtagtatcaatccttgcgaaacgttgtttgtt
gtggattcgatgaccggtcaggatgcggccaataccgctaaggcatttaatgatgcgttg
ccattgaccggtgtgattcttaccaaaaccgacggtgatgctcgcggtggtgccgcttta
tcgattcgtgagattaccggtaagccgatcaagtttatcggtgcgggtgaaaaaaccgat
gccttagaaccgttccacccggatcgtatggccggacgaattctgggtatgggcgatgtg
ttgagtttgatcgaagaggccgaagccaaaatcgatcagaaaaaagcgcagaaatttgcc
cagaaagtgcagaagtcaggacagttcgatttggaagactttttagagcagctccaacaa
attaataatatgggcggcgttggcggcctgatgggcaagttgccggggatggaccagtta
aaaggtcaggtcgacggcgataaggcggaaaaggaatttaaacgtctggaagcgattatc
tattctatgaccaagcaggagcgtcgcttccctgccgtcatcaaaggttcacgtaaacgt
cgtattgccgctggttcgggaacttcggtgccggatgtgaatcgcttattgaagcagttt
acacaaatgcagaagatgatgaaaaaaatgaaaggtggcggtatgaaaaacctgatgcgc
ggcttggctggtaaattaccaccaggtatgggcggcatgggtggattaccgccgggtatg
cgttaa

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