Thiomicrorhabdus sediminis: FE785_04330
Help
Entry
FE785_04330 CDS
T05983
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thig03000
]
FE785_04330
Transcription factors [BR:
thig03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FE785_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
MarR_2
HTH_50
DUF6106
Motif
Other DBs
NCBI-ProteinID:
QCU89916
UniProt:
A0A4P9K6H4
LinkDB
All DBs
Position
complement(949899..950828)
Genome browser
AA seq
309 aa
AA seq
DB search
MLNITFNQIRLFATVARHKSFTKAAKELSISQPAVSSQLKKLAESIGDPLIEVVGRKVYL
TPIGETTYQQFQILLEDFEDFNTRLRTAQTDNLEGDLVIAGVSASKYFLPFIIAEFLKEH
PKVKPKLSILSKADTHKSLQNQEHELVISGRVIENIDAKFEPFANHTLAVVAHPNSRLHD
HAKLSLKSLLKQNLILPTTETSVRKAIDEVFADAGLTLEPYMELSSYESIKQSIMAGLGV
GILSTDAFRLEEHTGHLIRLNVSDFPIEKHWYYAVHNNTQLSTVALAFIEFLNRASIETH
IKQIYSPNL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatataacctttaatcaaattcgtctgtttgccacggtagcccgtcacaaaagc
tttaccaaagccgctaaagaactgagcatatctcaaccggcggtatccagccaattgaaa
aaactcgccgaatcgattggagaccccttaattgaagtggtcggtcgcaaggtctacctc
accccgattggtgaaaccacctatcaacaatttcagatactgttggaagatttcgaagac
ttcaacacccgcttacgcaccgctcaaaccgacaatcttgaaggtgacctggtcattgcc
ggagtgtcggcaagcaaatacttcctaccgtttattattgccgaattcttaaaagaacac
cctaaggtaaaacctaagctgtctattttaagcaaggccgacacccacaaaagcttgcaa
aaccaagaacatgaactggtgataagcggtcgagtcatcgaaaatatcgatgcgaaattt
gagccttttgccaaccacaccctagcggttgttgcccacccgaactcaagactgcacgat
cacgccaaactgagtttaaaaagtttgttaaagcaaaatctgattctgcctacaaccgaa
accagtgtgcgcaaggcgattgatgaagtctttgccgatgccggtctgaccttagaacct
tatatggaactgagcagttatgaatcgattaagcaatcgattatggccgggctgggtgtc
ggtattctatcaaccgatgccttccgtctggaagagcataccggccacttaatacgtttg
aatgttagtgattttccaatcgaaaaacactggtactacgctgttcacaataacacacag
ctttcgacagtcgcgctagcctttatcgagtttttaaaccgcgcttcaatcgaaacccat
atcaaacagatttacagccctaacctgtaa
DBGET
integrated database retrieval system
