Thiomicrorhabdus sediminis: FE785_04665
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Entry
FE785_04665 CDS
T05983
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00220
Arginine biosynthesis
thig00240
Pyrimidine metabolism
thig00250
Alanine, aspartate and glutamate metabolism
thig01100
Metabolic pathways
thig01110
Biosynthesis of secondary metabolites
thig01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FE785_04665 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FE785_04665 (carB)
00220 Arginine biosynthesis
FE785_04665 (carB)
Enzymes [BR:
thig01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FE785_04665 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
DUF4857
IcmF-related
Motif
Other DBs
NCBI-ProteinID:
QCU89975
UniProt:
A0A4P9K4S6
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All DBs
Position
1032069..1035281
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AA seq
1070 aa
AA seq
DB search
MPKRTDLKSIMIIGAGPIIIGQACEFDYSGVQACKALKEEGYRVILVNSNPATIMTDPEL
ADATYIEPIEWKTVASIIAKEKPDAILPTMGGQTALNCALDLHDNGVLAEHGVELIGANA
DAIDKAENRDRFRQAMTKIGLDMPVSDVASNMEEAWAIQERVGFPTIIRPSFTLGGSGGG
IAYNKAEFEQICKFGLDLSPTNELLIEESILGWKEYEMEVIRDKKDNAIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPETGRMIIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNDITNGATPASFEPTIDYVVTKIP
RFTFEKFPQAQQRLSTQMKSVGEVMAMGRNFQESLQKALRGLETDKNGFDEIIPVEMDEK
DIKDTLRRELRDVGPERLWYVADAFRAGWDIEAVFDASKIDPWFLAQIKELIDMEDELKQ
RGLDALDETYLRQLKRKGFSDNRLAKLLNTDAAFIRKFRHTLNVRPVFKRVDTCAAEFET
STAYMYSSYDEECEANPSDKDKIMVLGGGPNRIGQGIEFDYCCVHAAMAMREDGYETIMV
NCNPETVSTDYDISDRLYFEPLTLEDVLEIVEVEQPKGVIVQYGGQTPLKLAEDLEAAGV
PIVGTSPESIDLAEDRERFQKILQDNDLLQPPNRTATSVEQAVTLANEIGYPLVVRPSYV
LGGRGMEIVYGEADLVRYMKAAIGVSNDSPVLLDRFLDDAVELDVDAVCDGEQVVIGGIM
EHIEQAGIHSGDSACSLPPYSISADVQDRVRVQVEKMAKALGVVGLMNTQFAIKGDDIYV
LEVNPRASRTVPFVSKAIGQPLAKIAARCMVGQKLADQGFTAEVKPEHFSVKEAVFPFIK
FLGVDPILGPEMKSTGEVMGIGENFAQAYAKAQLAGGTVLPRSGKAFLSVRKADRVRVVD
LAKQLIARGFEIVATRGTATSLIEAGIECETVNKVTEGRPNIVDSIVNEEIALIVNTSDG
SVSIQDSSSIRREALMHKTCYTTTIAAGFAMVAAMDYLDDQPVNCLQNVH
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaacagacttaaaaagtattatgattattggtgccggtcctattattatc
gggcaggcatgtgaatttgactattctggtgttcaggcctgtaaggcactgaaagaagag
ggttaccgtgttattttggtgaactctaacccagcgaccattatgaccgatccagaactg
gccgatgccacttatatcgagccaatcgagtggaaaaccgttgcctctatcatcgccaag
gaaaagccggatgcgatcctgccgaccatgggggggcagacggcactgaactgtgcgttg
gatctacacgataatggcgttttggcagaacatggtgttgagctgatcggtgccaatgcc
gatgcgatcgataaagctgaaaaccgtgaccgtttccgtcaggcaatgaccaagatcggt
ttggatatgccggtttctgatgtggcttcaaatatggaagaagcttgggcgattcaagaa
cgtgtcggtttcccgactattatccgtccatcattcaccttggggggatccggtggtggt
atcgcctataacaaagccgaattcgaacagatctgtaagtttggtctagatctttcacca
actaatgagttattgattgaagaatcgattctgggttggaaagagtatgaaatggaagtt
atccgtgataagaaagataacgccattattatttgctcgattgaaaaccttgacccaatg
ggtgtgcataccggtgactctatcactgtggcgccggcacagacattgactgataaagaa
tatcaaatcatgcgtaacgcctccttggcggtattgcgtgaaatcggtgtcgaaaccggt
ggttcgaatgtacagttctcggtaaaccctgagaccggtcgtatgatcattatcgagatg
aatccgcgagtatcgcgttcatcggccttagcttcaaaagcgacaggtttcccgattgcc
aaggtcgctgcaaaattggcagtaggttataccctggatgaattgaaaaacgatattact
aacggtgcgacacctgcatcgtttgaaccgacgatcgactatgttgtcactaagattcct
cgtttcacattcgagaaattcccgcaagcacagcagcgtctgtcgactcagatgaagtcg
gtcggtgaggtgatggcgatgggtcgtaatttccaggaatctttgcaaaaagcgttgcgt
ggactggaaacggacaagaacggttttgatgaaatcatccctgttgagatggatgaaaaa
gacatcaaggatactttacgtcgtgaattgcgcgatgttgggcctgagcgtctatggtat
gtggcggatgcgttccgtgccggttgggatatcgaagcggtatttgatgcatcgaaaatc
gatccttggttcctggcgcagattaaagagcttatcgacatggaagatgagctgaaacag
cgtggtttggatgccttggatgaaacttatctgcgtcagttgaagcgcaaaggtttctca
gataaccgtcttgccaaactgttgaataccgatgcggcgtttatccgcaagttccgtcat
accttgaatgtacgcccggtgttcaagcgtgttgatacctgtgcggcggaattcgagaca
tcgactgcttatatgtattcatcatacgatgaagagtgtgaagcgaatccgtcggataaa
gacaagatcatggtattgggtggtggtccaaaccgtatcggtcaaggtatcgagtttgat
tactgttgtgttcacgctgccatggcgatgcgtgaagacggttatgaaaccattatggtt
aactgtaacccggaaacggtttctaccgattacgatatttcggatcgtctttatttcgag
ccgttaacgctggaagacgtattggaaatcgttgaagtcgaacagccaaaaggtgtgatc
gtccagtacggtgggcaaacgccgttgaaactggctgaagatcttgaagcggcgggtgta
ccgattgtcggtacttcaccggagtcaatcgatttggcggaagaccgtgagcgtttccag
aaaattctgcaagacaatgatttgttgcagccacctaaccgcacggcaaccagtgttgag
caggcggtaacgctggctaacgaaatcggttatccgctagtggtacgcccatcttatgta
ttgggtggtcgtggtatggaaatcgtttacggtgaagcggatctggttcgctacatgaaa
gcggcgattggtgtatcgaatgattctcctgtattgctggatcgtttcctggatgatgcg
gttgagctggatgtcgatgcggtttgcgacggtgaacaggtggttatcggcgggattatg
gaacacatcgaacaggccggtatccattcgggtgactcggcctgttcattgcctccttac
agtatttctgccgatgtacaggatcgtgtccgtgttcaggttgagaaaatggcgaaggcg
ttgggtgttgtcggtttgatgaacactcagttcgcgatcaaaggtgatgatatttacgtg
ctagaggttaaccctcgtgcttcacgtaccgtaccgtttgtctctaaagcgatcggtcag
ccgttggcgaaaatcgcggcgcgttgcatggttgggcagaagttggcggatcaaggcttt
actgcggaagttaagccggaacatttttcggtaaaagaagcggtattcccgttcatcaag
ttcctgggtgttgacccgattcttgggccggaaatgaagtcgaccggtgaggtgatgggt
attggtgaaaactttgcccaagcttatgccaaagcgcagttggcgggtggcactgtattg
cctcgttcaggtaaagcgttcttatcggtgcgtaaagcagacagagtacgtgtcgtcgat
ctggccaagcagctgattgctcgcggtttcgaaatcgtggcaactcgtggtaccgccact
tcgttaattgaagccggcattgaatgtgaaacggtgaacaaggtgacggaagggcgtccg
aatattgtcgactcaatcgtcaatgaagagattgcgttgattgtcaacacttctgacggt
tcggtcagtattcaggattcatcgagcatccgtcgagaagctttgatgcataagacctgt
tataccacaaccattgcagccggtttcgcgatggttgcagcaatggattatcttgatgac
cagccagtgaattgtttgcaaaacgttcactaa
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