Thiomicrorhabdus sediminis: FE785_04750
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Entry
FE785_04750 CDS
T05983
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FE785_04750 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thig01007
]
FE785_04750 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thig03016
]
FE785_04750 (lysS)
Enzymes [BR:
thig01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FE785_04750 (lysS)
Amino acid related enzymes [BR:
thig01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FE785_04750 (lysS)
Transfer RNA biogenesis [BR:
thig03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FE785_04750 (lysS)
Prokaryotic type
Other AARSs
FE785_04750 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
QCU89988
UniProt:
A0A4P9K552
LinkDB
All DBs
Position
1049729..1051240
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AA seq
503 aa
AA seq
DB search
MSETQNTVPEVDENKIIAERRAKLTSLREEGHSYPNSFRRENSAADLQAEYSGFEKEALA
EMEPVRVKVAGRMMLRRIMGKASFATLQDHTGRIQVYVTRDELPEGFYNTQFKKWDLGDI
IGAEGYLFKTNTGELSIHVESIELITKSIRPLPDKFHGLQDQEMRYRQRYVDLIVNQESR
ETFMLRSKIVQHVRNFLIRKEFMEVETPMMHVIPGGATAKPFATHHNALDMPLFLRIAPE
LYLKRLVVGGFERVFEINRSFRNEGLSTRHNPEFTMVEFYAAYTDYHQLMDYTEELLKEL
AELALGSTKVPYQGQEFDFGKPFARLTMKDAIMQYNPDITAEQLDSLESATAIAQSLHIK
LPEGAGLGKVMTEIFEETVEEKLMDPTFITEYPAEVSPLARRNDENPFITDRFELFIGGR
ELANGFNELNDAEDQAERFKAQVEAKDAGDDEAMHFDEDYITALEHGMPPTAGEGIGIDR
LVMLFTDSASIRDVLLFPHMRQN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacacaaaatactgtgcctgaagttgatgagaataaaattattgccgaacgt
cgggcgaaattgacttcactaagagaagaagggcactcttaccctaacagtttccgtcgt
gagaacagtgccgccgatttacaggctgaatacagtggttttgagaaagaggcgttggct
gagatggagccggtacgtgttaaggttgccggtcgtatgatgttgcgtcgtattatgggt
aaggccagttttgcgactttgcaagaccacacaggccgtatccaggtctatgtgactcgt
gatgaattgccggaaggtttctataacactcaattcaagaaatgggatttgggtgatatt
atcggtgccgaaggttacctgttcaaaaccaatactggtgagctgtctatccatgttgaa
agcatcgagttgattaccaaatcgatccgtccattaccggataagtttcacggtctgcaa
gaccaggaaatgcgataccgccagcgttatgtggatttgatcgttaaccaggaaagccgc
gaaacgttcatgctgcgttcaaaaatcgtccagcacgtgcgtaacttcctaatccgtaaa
gagtttatggaagtggaaacgccgatgatgcatgttatccccgggggggccacagccaag
ccgtttgccacacaccacaatgctttggatatgccattgttcttgcgtatcgcgccggaa
ctttatctaaagcgtctggttgttggtggctttgagcgtgttttcgaaatcaaccgttct
ttccgtaacgaagggctatcgacgcgtcacaatccggagttcactatggttgaattctac
gcggcctataccgattaccaccagttgatggactacaccgaagaactgttgaaagaattg
gcagaactggctctgggttcaaccaaggtgccataccaaggtcaggagttcgatttcggt
aagccgttcgcacgtttaaccatgaaagatgcgatcatgcagtacaacccagatatcact
gctgagcagttggattcacttgagtctgcaacggcaatcgcacagtctttgcatattaag
ctaccggaaggtgctggccttggcaaggtaatgaccgagatctttgaggagaccgttgaa
gaaaaactgatggatccgactttcattaccgagtatccggcggaagtttctccattggcg
cgtcgtaatgatgaaaacccgtttatcaccgaccgtttcgaactgtttatcggaggtcgt
gaattggctaacggtttcaacgagttgaacgatgctgaagatcaggcagagcgtttcaag
gctcaggtagaagctaaagatgccggtgatgatgaagcgatgcacttcgatgaagactac
atcaccgcgctagagcacggtatgccaccaacagcgggtgaaggtatcggtatcgaccgt
ttggtgatgctattcaccgattcggcctctatccgtgatgttctattgttcccgcatatg
cgtcaaaactaa
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