Thiomicrorhabdus sediminis: FE785_04810
Help
Entry
FE785_04810 CDS
T05983
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FE785_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thig03019
]
FE785_04810
03009 Ribosome biogenesis [BR:
thig03009
]
FE785_04810
03036 Chromosome and associated proteins [BR:
thig03036
]
FE785_04810
Enzymes [BR:
thig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FE785_04810
Messenger RNA biogenesis [BR:
thig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FE785_04810
Ribosome biogenesis [BR:
thig03009
]
Eukaryotic type
90S particles
RNase
FE785_04810
Prokaryotic type
rRNA processing factors
FE785_04810
Chromosome and associated proteins [BR:
thig03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FE785_04810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
DUF5370
Motif
Other DBs
NCBI-ProteinID:
QCU89999
UniProt:
A0A4P9K4W1
LinkDB
All DBs
Position
1063173..1063880
Genome browser
AA seq
235 aa
AA seq
DB search
MAKATKLTQERIAKLQQLANKLGYQYQDIGFLQHALTHRSMGARNNERLEFLGDSLVNFV
IADVLFHQFAKLPEGDMSRVRAHLVKGDTLAVIGREYDLSDYLVLGPGELKSGGYRRDSI
IADAVEAIIASVYEDGGLEACRAMVMRFYDKRLQELDPKKVGKDPKTRLQEFLQSRNEAL
PEYSIISVNGAAHAQEFTVSCFVAKLNSKFEAVASSRRKAEQKAAEIALEALDQL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcgactaaattgacacaggaacgtatcgcaaaactgcaacagttggctaac
aaactgggttatcaatatcaggatatcggttttctgcagcacgctttaacgcaccgcagt
atgggggcgagaaacaatgagcgtcttgaattcctcggcgatagcctggttaacttcgtg
attgccgatgtcctgttccatcagtttgccaagttgcccgaaggtgatatgagccgtgtt
cgcgcccatttggtcaagggtgatacgctggcggtaatcggccgagaatatgatttaagc
gattatttggtattggggccgggcgagctgaaaagcggtggttaccgtcgtgattccatt
attgccgatgcggtcgaagcgattatcgcctcggtttatgaagacggtggtctggaagct
tgccgtgccatggttatgcgtttttacgataaacgcttgcaagagcttgatccgaaaaaa
gtcggtaaggaccctaaaacccgtttgcaggagttcctacaatcgcgcaatgaggcttta
ccggaatactccattatcagtgtcaatggtgccgcacatgcgcaggagtttaccgtgtca
tgttttgtcgccaaattaaacagtaagtttgaagcggttgcttcaagccgtcgtaaagcc
gaacaaaaagccgccgaaattgccttggaagcattggaccagttataa
DBGET
integrated database retrieval system
