KEGG   Thiomicrorhabdus sediminis: FE785_05000
Entry
FE785_05000       CDS       T05983                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig00010  Glycolysis / Gluconeogenesis
thig00020  Citrate cycle (TCA cycle)
thig00260  Glycine, serine and threonine metabolism
thig00280  Valine, leucine and isoleucine degradation
thig00310  Lysine degradation
thig00380  Tryptophan metabolism
thig00620  Pyruvate metabolism
thig00630  Glyoxylate and dicarboxylate metabolism
thig00640  Propanoate metabolism
thig00670  One carbon pool by folate
thig00785  Lipoic acid metabolism
thig01100  Metabolic pathways
thig01110  Biosynthesis of secondary metabolites
thig01120  Microbial metabolism in diverse environments
thig01200  Carbon metabolism
thig01210  2-Oxocarboxylic acid metabolism
thig01240  Biosynthesis of cofactors
Module
thig_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
thig_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:thig00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FE785_05000 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FE785_05000 (lpdA)
   00620 Pyruvate metabolism
    FE785_05000 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FE785_05000 (lpdA)
   00640 Propanoate metabolism
    FE785_05000 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FE785_05000 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FE785_05000 (lpdA)
   00310 Lysine degradation
    FE785_05000 (lpdA)
   00380 Tryptophan metabolism
    FE785_05000 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FE785_05000 (lpdA)
   00670 One carbon pool by folate
    FE785_05000 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:thig04147]
    FE785_05000 (lpdA)
Enzymes [BR:thig01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FE785_05000 (lpdA)
Exosome [BR:thig04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FE785_05000 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored AlaDh_PNT_C GIDA NAD_binding_8 FAD_binding_2 GCV_H FAD_binding_3 HI0933_like DAO 3HCDH_N Thi4
Other DBs
NCBI-ProteinID: QCU90035
UniProt: A0A4P9K4X0
LinkDB
Position
1103656..1105437
AA seq 593 aa
MTKIVDIVIPDIGDFAEVDVIEVLVSAGDEVAQDDSLVTLESDKATMEIPAPFAGKIVSL
TAAVGDKASEGSIIGTMEIANTETVAANVEDSVAHEAPKPEATPAQQAEAPQAVSAADLP
PADMTCEVLVLGSGPGGYTAAFRAADLGKKVVMIERYENIGGVCLNVGCIPSKALLHMSV
VLNETREMGAHGITFAEPEIDTNKMRAYKDSVIGKLTGGLAGLAKARKVEVVQGYGKFSS
ANTVTVDMADGSTKTIAFEKAIIAAGSRVVKLPFIPHDDPRVMDSTDALELEEVPKRMLV
IGGGIIGLEMAQVYDSLGASITVVELGDTIIPGADKDISKPLLKKIKKQYENVFLKSKVT
NVEAKDEGLVVTFEGKDCPETDTFDRILVAVGRTPNGKLIDAEKAGVAVNDWGFIEVDER
QKTNVDHIYAIGDIVGQPMLAHKAVHEGKVAAEVISGMNSAFTPMGIPSVAYTDPEVAWA
GKTETELKAEGVEYEKGAFPWAASGRSLSLGRDEGLTKALFCAKTHRLLGCGIVGPNAGE
LVAEAMLAIEMGADMQDIGLTIHPHPTLSETICFAAEMAEGTITDLMPPKKRK
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgaccaagattgtagatattgttattcctgatatcggtgactttgccgaagttgatgtg
attgaagtgctggttagtgccggtgatgaagtggcgcaggacgattctctggtcaccttg
gaatcggataaggcgacgatggaaattccggcgccgtttgccgggaaaattgtttctctg
accgcggcggtaggtgataaggcctctgaaggttcgattatcggaaccatggaaatcgcc
aataccgaaaccgtggcggcgaatgttgaagacagcgtggcgcacgaagctcctaagcct
gaagcaactccagctcagcaggccgaagctccacaagcggtctcagcggcggatttaccg
cctgccgatatgacatgcgaagtgttggtgctaggttcgggccctggtggttatactgcc
gccttccgtgccgccgatctaggtaaaaaagtggtgatgatcgagcgttatgaaaacatc
ggtggtgtttgtctaaacgttggttgtattccgtctaaagcgctattgcatatgtcggtc
gtactgaacgaaacccgcgaaatgggtgcgcacggtatcactttcgccgagcctgaaatc
gacaccaataaaatgcgagcttacaaagactcggttatcggtaagctaaccggtggtttg
gcgggtcttgccaaggcgcgtaaggttgaagtcgttcaaggttacggtaagttcagctcg
gccaataccgtcacggttgatatggctgatggttcaaccaagaccatcgcctttgaaaaa
gcgattatcgctgccggttcacgcgtggtgaaactgccgtttatcccgcatgacgatccg
cgtgttatggattcaaccgatgcattggaacttgaagaagtaccaaaacgtatgctggtt
atcggtggtgggattatcggtctggaaatggcgcaggtttatgactcactgggtgcgagc
atcaccgtggtcgaactgggcgataccattattccgggtgccgataaggacatttccaag
ccgctattgaagaaaatcaaaaagcagtacgaaaacgtgttcctaaaatcaaaagtcacc
aatgtcgaagccaaagacgaaggtctggtggtgacattcgaaggtaaggattgcccggaa
accgatacgtttgatcgtatcttggttgcggtagggcgtacaccaaacggtaaactgatc
gatgccgagaaagccggtgttgcggtcaacgattggggctttatcgaagtcgatgaacgc
cagaaaaccaatgttgatcacatctatgcgatcggtgatatcgttggtcagccaatgctg
gcgcacaaagcggttcacgaaggcaaggtcgctgccgaagtgatctctggcatgaacagt
gcctttacgccaatggggattccatcagttgcttataccgatccggaagtggcttgggct
ggtaagactgaaactgaacttaaggccgaaggcgttgagtatgaaaaaggtgctttccca
tgggcggcatcgggtcgtagcttgagtctggggcgtgacgaaggtctgaccaaagcgttg
ttctgcgccaagacacatcgtttgttgggttgtggtattgtcgggcctaacgccggtgaa
ctggttgccgaagcgatgctagcgattgagatgggggctgatatgcaagatatcgggctg
accatccatccacatccgacattgagtgagacgatctgctttgcggcggagatggcggag
gggacaatcaccgacctaatgccaccaaaaaaacgtaaatag

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