Thiomicrorhabdus sediminis: FE785_05000
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Entry
FE785_05000 CDS
T05983
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00010
Glycolysis / Gluconeogenesis
thig00020
Citrate cycle (TCA cycle)
thig00260
Glycine, serine and threonine metabolism
thig00280
Valine, leucine and isoleucine degradation
thig00310
Lysine degradation
thig00380
Tryptophan metabolism
thig00620
Pyruvate metabolism
thig00630
Glyoxylate and dicarboxylate metabolism
thig00640
Propanoate metabolism
thig00670
One carbon pool by folate
thig00785
Lipoic acid metabolism
thig01100
Metabolic pathways
thig01110
Biosynthesis of secondary metabolites
thig01120
Microbial metabolism in diverse environments
thig01200
Carbon metabolism
thig01210
2-Oxocarboxylic acid metabolism
thig01240
Biosynthesis of cofactors
Module
thig_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
thig_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FE785_05000 (lpdA)
00020 Citrate cycle (TCA cycle)
FE785_05000 (lpdA)
00620 Pyruvate metabolism
FE785_05000 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FE785_05000 (lpdA)
00640 Propanoate metabolism
FE785_05000 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FE785_05000 (lpdA)
00280 Valine, leucine and isoleucine degradation
FE785_05000 (lpdA)
00310 Lysine degradation
FE785_05000 (lpdA)
00380 Tryptophan metabolism
FE785_05000 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FE785_05000 (lpdA)
00670 One carbon pool by folate
FE785_05000 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thig04147
]
FE785_05000 (lpdA)
Enzymes [BR:
thig01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FE785_05000 (lpdA)
Exosome [BR:
thig04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FE785_05000 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
AlaDh_PNT_C
GIDA
NAD_binding_8
FAD_binding_2
GCV_H
FAD_binding_3
HI0933_like
DAO
3HCDH_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
QCU90035
UniProt:
A0A4P9K4X0
LinkDB
All DBs
Position
1103656..1105437
Genome browser
AA seq
593 aa
AA seq
DB search
MTKIVDIVIPDIGDFAEVDVIEVLVSAGDEVAQDDSLVTLESDKATMEIPAPFAGKIVSL
TAAVGDKASEGSIIGTMEIANTETVAANVEDSVAHEAPKPEATPAQQAEAPQAVSAADLP
PADMTCEVLVLGSGPGGYTAAFRAADLGKKVVMIERYENIGGVCLNVGCIPSKALLHMSV
VLNETREMGAHGITFAEPEIDTNKMRAYKDSVIGKLTGGLAGLAKARKVEVVQGYGKFSS
ANTVTVDMADGSTKTIAFEKAIIAAGSRVVKLPFIPHDDPRVMDSTDALELEEVPKRMLV
IGGGIIGLEMAQVYDSLGASITVVELGDTIIPGADKDISKPLLKKIKKQYENVFLKSKVT
NVEAKDEGLVVTFEGKDCPETDTFDRILVAVGRTPNGKLIDAEKAGVAVNDWGFIEVDER
QKTNVDHIYAIGDIVGQPMLAHKAVHEGKVAAEVISGMNSAFTPMGIPSVAYTDPEVAWA
GKTETELKAEGVEYEKGAFPWAASGRSLSLGRDEGLTKALFCAKTHRLLGCGIVGPNAGE
LVAEAMLAIEMGADMQDIGLTIHPHPTLSETICFAAEMAEGTITDLMPPKKRK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagattgtagatattgttattcctgatatcggtgactttgccgaagttgatgtg
attgaagtgctggttagtgccggtgatgaagtggcgcaggacgattctctggtcaccttg
gaatcggataaggcgacgatggaaattccggcgccgtttgccgggaaaattgtttctctg
accgcggcggtaggtgataaggcctctgaaggttcgattatcggaaccatggaaatcgcc
aataccgaaaccgtggcggcgaatgttgaagacagcgtggcgcacgaagctcctaagcct
gaagcaactccagctcagcaggccgaagctccacaagcggtctcagcggcggatttaccg
cctgccgatatgacatgcgaagtgttggtgctaggttcgggccctggtggttatactgcc
gccttccgtgccgccgatctaggtaaaaaagtggtgatgatcgagcgttatgaaaacatc
ggtggtgtttgtctaaacgttggttgtattccgtctaaagcgctattgcatatgtcggtc
gtactgaacgaaacccgcgaaatgggtgcgcacggtatcactttcgccgagcctgaaatc
gacaccaataaaatgcgagcttacaaagactcggttatcggtaagctaaccggtggtttg
gcgggtcttgccaaggcgcgtaaggttgaagtcgttcaaggttacggtaagttcagctcg
gccaataccgtcacggttgatatggctgatggttcaaccaagaccatcgcctttgaaaaa
gcgattatcgctgccggttcacgcgtggtgaaactgccgtttatcccgcatgacgatccg
cgtgttatggattcaaccgatgcattggaacttgaagaagtaccaaaacgtatgctggtt
atcggtggtgggattatcggtctggaaatggcgcaggtttatgactcactgggtgcgagc
atcaccgtggtcgaactgggcgataccattattccgggtgccgataaggacatttccaag
ccgctattgaagaaaatcaaaaagcagtacgaaaacgtgttcctaaaatcaaaagtcacc
aatgtcgaagccaaagacgaaggtctggtggtgacattcgaaggtaaggattgcccggaa
accgatacgtttgatcgtatcttggttgcggtagggcgtacaccaaacggtaaactgatc
gatgccgagaaagccggtgttgcggtcaacgattggggctttatcgaagtcgatgaacgc
cagaaaaccaatgttgatcacatctatgcgatcggtgatatcgttggtcagccaatgctg
gcgcacaaagcggttcacgaaggcaaggtcgctgccgaagtgatctctggcatgaacagt
gcctttacgccaatggggattccatcagttgcttataccgatccggaagtggcttgggct
ggtaagactgaaactgaacttaaggccgaaggcgttgagtatgaaaaaggtgctttccca
tgggcggcatcgggtcgtagcttgagtctggggcgtgacgaaggtctgaccaaagcgttg
ttctgcgccaagacacatcgtttgttgggttgtggtattgtcgggcctaacgccggtgaa
ctggttgccgaagcgatgctagcgattgagatgggggctgatatgcaagatatcgggctg
accatccatccacatccgacattgagtgagacgatctgctttgcggcggagatggcggag
gggacaatcaccgacctaatgccaccaaaaaaacgtaaatag
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