Thiomicrorhabdus sediminis: FE785_05255
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Entry
FE785_05255 CDS
T05983
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thig03009
]
FE785_05255 (rimO)
Enzymes [BR:
thig01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FE785_05255 (rimO)
Ribosome biogenesis [BR:
thig03009
]
Prokaryotic type
ribosomal protein modification factors
FE785_05255 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
BpuJI_N
YebF
Sigma54_CBD
CLP1_P
Methyltransf_2
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QCU90081
UniProt:
A0A4P9K5K1
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All DBs
Position
1151651..1153024
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AA seq
457 aa
AA seq
DB search
MSIRQPTVGVISLGCPKATVDSERILTQLRTEGYQLTNSYQDADTVIVNTCGFIDSAVQE
SLDTIGEALQENGKVIVTGCLGAKEQQILDVHPKVLAVSGPAAYEEVLSAVHNVVEPPSH
NPFVDLVPPQGIKLTPKHFAYLKISEGCNHRCTFCIIPSMRGDLVSRPVSEVISEAKRLK
EAGVKELLVVSQDTAAYGVDTQYKMEFAEGRPTKTSMVGLSEALGELGGVDEFWVRLHYV
YPYPNVEEVIPLMAEGKILPYLDMPLQHANPRVLKAMKRPGNVEKTLERINKWREMVPNL
TIRSTFIVGFPGETEEEFQDLLDFIEAAQLDRVGCFQYSPVEGATANEIAEQVPDDIKQE
RFDHFMKLQQQISAAKMQAKVGQVMQVLIDEIDDKGAVARSMADAPEIDGMVFIDDAFHL
QPGQFVKVEIIGADEYDLWAKTIEEFEPQENSYVELG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcgccagcctaccgttggagttattagtcttggttgcccgaaagcgaccgtt
gatagtgagcgtatcttgacgcagttacgtactgaaggataccagttgaccaatagctat
caggatgccgataccgttatcgtcaatacctgtggttttatcgatagcgcggtgcaggaa
tctttggatactatcggtgaggctttgcaggaaaacggtaaggtaatcgttaccggttgt
ttaggtgccaaagaacagcagatccttgatgtgcatccaaaggttctggccgtttccggt
ccagcggcttacgaagaagtcttgagcgccgttcataatgtggtcgagccgcctagtcat
aacccttttgttgatttggtgccaccgcaaggcattaagctgacccctaagcattttgcg
tatctgaaaatctcggagggatgtaatcaccgttgtaccttctgcattattccgtcaatg
cgcggtgatttggtaagtcgtccggtcagtgaggtgatttccgaagcgaaacgtctaaaa
gaggcgggggtaaaagagctgctggtggtctctcaggatacggctgcctatggtgtcgat
acccaatataaaatggaatttgccgaaggtcgtccaaccaaaacctcaatggtcggttta
tccgaagccttgggcgagctaggtggcgttgatgaattctgggtccgtttacactatgtt
tatccttatccaaatgttgaggaagtgattcctctaatggccgaaggcaaaatcctgcct
tatctggatatgccgttacagcacgctaaccctcgggtactcaaagcgatgaaacgtccc
gggaatgtcgaaaagacactggaacgcatcaataaatggcgtgagatggtaccgaacctg
acgattcgttcgacctttattgtcggtttcccgggcgaaaccgaggaagaattccaagac
ttactcgattttatcgaagcggcgcaattggatcgtgtcggttgcttccagtattcaccg
gtagaaggggccactgctaacgagatcgccgagcaggtaccggatgatatcaagcaagag
cgttttgatcactttatgaagttgcagcagcagatcagtgcggcaaaaatgcaagccaaa
gtgggtcaggtcatgcaggttctgatcgatgaaattgacgataagggtgcggtcgcgcgt
tccatggccgatgcaccggaaatcgatggtatggtgtttattgatgacgctttccatctg
cagccagggcagttcgtcaaggttgagatcattggtgccgatgaatatgacctttgggcg
aaaaccatcgaagagtttgagccacaggaaaactcttatgttgagctgggttaa
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