Thiomicrorhabdus sediminis: FE785_05355
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Entry
FE785_05355 CDS
T05983
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FE785_05355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thig02000
]
FE785_05355
Transporters [BR:
thig02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FE785_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCU91129
UniProt:
A0A4P9K7T9
LinkDB
All DBs
Position
1170934..1173141
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AA seq
735 aa
AA seq
DB search
MQTVSAAVENPSQTMQSAASWNSPYPEDVIAEQTLFSAFGSPPKHLDPVVSYNSNEWAIL
SQIYEPPLQYHYLKRPYQLEPLTLKAMPTVSYLDKNLQSVKVNSKKMVYSEYLFELEPDV
FYKSHPAFAKKADQYLYHDLTDTRLEQFSKPWQSIKSVYDFDQLQSRELIAADYVYAIKR
MALRQNHSPVLDSMLPYIVGLQEFSETQTKLYQQQLKASGKNSKSLYYDLTNVQISGVKV
IDKYRFSIRVNGVYPQFLYWLTMNFFAPIPWEADKFYKQQLLVEKNLTLDTSPVGTGPYY
LAENNPNQRMRLLKNPQFHQEFYPSDGLADDADQALLDDAGKKLPFINEVIYSLEKENVP
LWNKFLQGYYDASGVSSDSFDQAVKVSAGGNMRLTEVMQQKGIQFLSQVQPTIYYFGFNM
ADPVVGGYSVKQQKLRQAISIALNFEEYISIFMNGRGVAAQGPIPPGITGYRDGKEGVNP
YVYEWKENRQQRRSIEQAKQLLKDAGYENGLNADGEALTLYYDTAATGPDSQAQLSWYRK
QLAKLGINLVIRATDYNRFQDKVRGAKVQLFSWGWNADYPDPENFLFLLYGANATINTNG
SGINSANYDNPEFNKLFKRMKNMANGAEREEVIKKMIAIVQKDAPWAWGINPKSLTLYHG
WLKNVWPNALANNTIKYRRIDTEQRLLAQQQWNKPVVWPLWLLLALLLISIWPLFRAYQK
RQAEVIKPQTDQGGY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggtttcggccgctgtagagaacccttcgcaaacaatgcaatcggcagcgagc
tggaattcgccttatccggaagatgttatcgctgaacaaaccctgttttccgcattcggc
tcaccgccaaaacatttagatccggtggtttcctataactcgaatgagtgggcgattctc
agtcagatttacgagccgcccctgcagtatcattatttaaagcgtccgtatcaattggaa
cctttgacattaaaggcaatgccaactgtttcctatttggataaaaacctacagtcggtc
aaagtcaattcgaaaaaaatggtttacagtgaatatctattcgagctcgagcccgatgtt
ttttacaaatcgcatccggcgtttgccaaaaaagccgaccaatacctttatcacgattta
acagacacacggcttgaacaattctcgaagccgtggcaatcaatcaaaagcgtctatgat
tttgatcagttgcaaagtcgagagctgatcgccgcagattatgtttatgccattaaacgt
atggcgttaagacaaaaccattcaccggtgttggattctatgttgccttatattgtcggt
ttgcaagagttttccgagacccagaccaagctttatcagcagcagttaaaagccagtggt
aaaaactctaaatcactttattatgatttaacaaatgttcaaataagtggtgttaaagtt
attgataaatatcgtttttctatccgggttaatggcgtttatccgcagtttttatattgg
ctgaccatgaacttctttgcgccgattccttgggaagcggataagttttataagcagcaa
ttgctggttgagaaaaacctgacgcttgatacctctccggttggtaccgggccttattat
ctggctgagaacaatcccaatcaacgtatgcgtttattgaagaacccgcaatttcatcaa
gagttttatccgagcgatggccttgcagacgatgccgatcaggcattgttggatgatgcg
ggtaaaaaactgccgtttatcaatgaagtgatttacagtcttgaaaaagaaaatgtgccg
ttgtggaataagtttttgcagggctattatgatgcctccggtgtcagttctgacagtttt
gaccaagcggttaaggtttctgccggaggcaatatgcgtttgaccgaggtgatgcagcaa
aaaggcattcagtttttaagccaggtgcagccgaccatctattactttggctttaatatg
gcagacccggttgtcggcggctattcagtcaaacaacaaaaattgcgtcaagccatctct
atcgcgttaaatttcgaagagtatatttccatttttatgaatggccgaggggttgccgca
caaggaccaatcccaccgggtattaccggttatagggatggcaaagagggagttaaccct
tatgtttatgagtggaaagaaaaccgtcaacagcgccgtagtatcgagcaggccaaacag
ctgctgaaagacgccggttatgaaaacgggctcaatgccgatggtgaagcgcttacgctt
tattatgatactgcagccaccggaccggacagtcaggcgcaactgagctggtatcgtaaa
cagttggccaagcttggcatcaatctggtgattcgtgccaccgattacaatcgttttcag
gataaggtgcgtggtgccaaggtgcaactgttctcctggggctggaatgccgattatccg
gatccggaaaactttctgtttttgctgtatggtgccaatgccactatcaataccaatgga
agcggtatcaatagcgccaattatgacaaccctgagttcaataagttgtttaagcgtatg
aaaaacatggcaaacggagccgagcgtgaagaggtcattaaaaagatgatcgccatagtg
caaaaggacgcgccttgggcttgggggatcaatcctaagtccttaacgctttatcatggt
tggttgaaaaacgtctggccgaatgcgctggcgaacaataccatcaaatatcgtcgtatc
gatacagagcagcggttactagcgcagcagcaatggaataagccggttgtttggccgctt
tggctcttgttggcattgctgctgatcagcatctggccgcttttcagggcttaccaaaaa
cgccaggctgaagtgattaagccgcaaacagatcaggggggctattga
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