Thiomicrorhabdus sediminis: FE785_05370
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Entry
FE785_05370 CDS
T05983
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FE785_05370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thig02000
]
FE785_05370
Transporters [BR:
thig02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FE785_05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_22
AAA_29
AAA_16
nSTAND1
ResIII
AAA_7
Mg_chelatase
RsgA_GTPase
ABC_ATPase
CbiA
AAA_18
AAA_19
nSTAND3
AAA_5
APS_kinase
ATP-synt_ab
PRK
AAA_15
SWI2_SNF2
NB-ARC
DUF815
Sigma54_activat
NACHT
DUF5906
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QCU90099
UniProt:
A0A4P9K554
LinkDB
All DBs
Position
1175503..1177173
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AA seq
556 aa
AA seq
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MSSVNEPIQTVTNQNQLPAKVLDVKGLSLHVGDKCLIDNISFDINQAEIFALVGESGSGK
SLTSLAVMRLLPEAIQVSSGDVVLDRIDVFSQTESQMQTIRGKRVAMIFQEPMTSLNPVM
KVGDQVAEVLRRHLGLKSKAARLSVVELFEEVGIPDADARYDWYPHQLSGGQKQRVMIAM
ALACEPDLLIADEPTTALDVTIQAQVLDLLKSIRDARGLSILFITHDMGVVYEMADRVAV
MKQGKIIEMADKNQFFSAASQPYTQQLLSDAIPAQELKSVEDKAPLLTLNELKVHFPVKK
GIFQRTVGHVKAVDGVSLSIAKGQTLALVGESGSGKSTIGQAILKLVNQTDGAVTFIDNE
NVINLSDLSERQMKPLRKKIQVIFQDPFSALNPRMTISEIIREGMVSLKVGEPTKVWQDQ
RIDELLSQVGLDIEAKYRYPHEFSGGQRQRIGIARALAVEPELIICDEPTSALDVSVRAQ
VLKLLDELQQKYQLSYLFITHDLSIIPSIAHQVAVMQKGKIVEQGTVAEVMHNPQHDYTK
QLLASAPELIRKAISA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtgaatgagcctatacaaactgtcaccaatcaaaatcagttacctgcaaag
gtgctcgatgtcaaaggcttgagtctgcatgttggtgataagtgcctgatcgataatatc
agttttgatatcaatcaggcagagatattcgcattggtcggggaatccggtagtggtaaa
tcattgacctcgttggcagtgatgcgtttgctgccagaagcgattcaagtgagttcaggc
gatgtggttttagatcggatcgatgtgttttcgcagaccgaatcacaaatgcagactatt
cgcggtaagcgtgtggcgatgatttttcaggagccgatgacttcacttaatccggtgatg
aaagtgggggatcaggtcgctgaagtgttgcgccgtcatttgggtttgaaaagcaaagcc
gcacgcttgagcgtggtggaactgtttgaagaggtgggtattcccgatgccgatgcccgt
tatgactggtatccgcatcaactctccggtggtcaaaaacaacgagtgatgatcgccatg
gctttggcctgtgaaccggacctgttgattgccgatgaaccgactaccgctttggatgtg
accattcaggcgcaagtattggatttattaaagtcgattcgagatgcgcgtggtctatcg
attttgtttatcacccacgatatgggagtggtgtatgaaatggcagaccgtgttgcggtg
atgaaacaaggtaaaatcatcgagatggcggataaaaatcagttttttagtgccgccagc
cagccttatacccagcaactgttaagtgatgccattcccgcccaagagttgaaatctgtg
gaagacaaggcgccattattgaccttgaacgagcttaaggtgcattttccggtgaaaaaa
ggcattttccagcgcacggttggtcatgttaaggcggtggatggcgtgagccttagtatt
gccaaggggcagacgctagcattggtgggagagtcgggttccggtaaaagcactatcggg
caggcgattcttaaattggtcaatcaaacggatggcgccgtcacttttatcgataatgag
aatgtcatcaatctatccgatttgtcggaaagacagatgaaacctttgcgtaaaaagatt
caggtcattttccaagacccgttttccgcccttaacccgcgaatgaccattagcgagatt
attcgcgagggtatggtgagcctgaaagtcggtgagccaactaaggtgtggcaagaccag
cgtattgatgagctgttgagccaggttggtttggatattgaagccaaataccgttatccg
cacgagttttccggaggacagcgccagcgtatcggtattgctcgcgccttggcggtagag
cctgaattgattatctgcgatgagccaaccagcgccttggatgtctcggtgcgcgcacag
gtattaaagctgctcgatgaattgcagcagaaatatcaattgtcgtatctattcattacc
catgatctatcgattatcccgtctatcgcacatcaggtcgcggtaatgcaaaaaggtaag
attgtcgaacagggtacggtggctgaggtcatgcataatccgcagcatgactacaccaag
caactattggcatcggctccggaactgattcgtaaagcgatttcggcttaa
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